RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TMEM192Q8IY95 271 aa18.37■□□□□ 0.53
RAB40C-202ENST00000509637 NEK9Q8TD19 979 aa18.37■□□□□ 0.53
RAB40C-202ENST00000509637 H3BQ06 376 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-202ENST00000509637 PIK3CDO00329 1044 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
RAB40C-202ENST00000509637 IRX6P78412 446 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-202ENST00000509637 ARHGAP4P98171 946 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 COL19A1Q14993 1142 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 UBE2SQ16763 222 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 TCEAL5Q5H9L2 206 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 RTN4RL1Q86UN2 441 aaPredicted RBP18.36■□□□□ 0.53
RAB40C-202ENST00000509637 LINC01599Q8WXQ3 324 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 KAT6AQ92794 2004 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 SENP7Q9BQF6 1050 aa18.36■□□□□ 0.53
RAB40C-202ENST00000509637 RC3H2Q9HBD1 1191 aaKnown RBP18.36■□□□□ 0.53
RAB40C-202ENST00000509637 GRXCR2A6NFK2 248 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 GPR37L1O60883 481 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 STAM2O75886 525 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 GHRP10912 638 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 LTBRP36941 435 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 GPM6BQ13491 265 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 LPIN1Q14693 890 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 GNPTABQ3T906 1256 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 RALYLQ86SE5 291 aaKnown RBP18.35■□□□□ 0.53
RAB40C-202ENST00000509637 MAP3K14Q99558 947 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
RAB40C-202ENST00000509637 AGO3Q9H9G7 860 aaKnown RBP18.35■□□□□ 0.53
RAB40C-202ENST00000509637 UBIAD1Q9Y5Z9 338 aa18.35■□□□□ 0.53
RAB40C-202ENST00000509637 TTC3P53804 2025 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 POTEB3A0JP26 581 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 ERICH2A1L162 156 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 SH2B2O14492 632 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-202ENST00000509637 ENPP3O14638 875 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 GRM6O15303 877 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 PRC1O43663 620 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 CAND2O75155 1236 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-202ENST00000509637 DLX2Q07687 328 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-202ENST00000509637 TMEM31Q5JXX7 168 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 PTCRAQ6ISU1 281 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-202ENST00000509637 POTEBQ6S5H4 581 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 RPAINQ86UA6 219 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 SMARCC2Q8TAQ2 1214 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 YME1L1Q96TA2 773 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
RAB40C-202ENST00000509637 PKD2L1Q9P0L9 805 aa18.34■□□□□ 0.53
RAB40C-202ENST00000509637 MARK3P27448 753 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 SMARCA1P28370 1054 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.524e-9■■■■■ 33
RAB40C-202ENST00000509637 CAMK1Q14012 370 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 TYW1BQ6NUM6 668 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 SKAP1Q86WV1 359 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 GJD3Q8N144 294 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 CRIPAKQ8N1N5 446 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 BANK1Q8NDB2 785 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 CYP2W1Q8TAV3 490 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 DNAJB3Q8WWF6 145 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 RUFY2Q8WXA3 655 aa18.33■□□□□ 0.52
RAB40C-202ENST00000509637 RRP36Q96EU6 259 aaKnown RBP18.33■□□□□ 0.52
RAB40C-202ENST00000509637 MBLAC1A4D2B0 266 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-202ENST00000509637 DDAH1O94760 285 aa18.32■□□□□ 0.52
RAB40C-202ENST00000509637 HOXD11P31277 338 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-202ENST00000509637 TRAF1Q13077 416 aa18.32■□□□□ 0.52
RAB40C-202ENST00000509637 CCDC82Q8N4S0 544 aa18.32■□□□□ 0.52
RAB40C-202ENST00000509637 ZNF689Q96CS4 500 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-202ENST00000509637 FAM122AQ96E09 287 aa18.32■□□□□ 0.52
RAB40C-202ENST00000509637 NRCAMQ92823 1304 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 SLC27A2O14975 620 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 ADAMTS3O15072 1205 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 GRIK4Q16099 956 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 FBXO47Q5MNV8 452 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 XRRA1Q6P2D8 792 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 TRAPPC12Q8WVT3 735 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 SEPT1Q8WYJ6 367 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 GPRASP2Q96D09 838 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 PSTPIP2Q9H939 334 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 LOXHD1Q8IVV2 1947 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 RALGAPA2Q2PPJ7 1873 aa18.31■□□□□ 0.52
RAB40C-202ENST00000509637 C5orf67F2Z3F1 127 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 GNAT1P11488 350 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 BMPR1AP36894 532 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 HYAL1Q12794 435 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 PPFIA1Q13136 1202 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 SART3Q15020 963 aaKnown RBP18.3■□□□□ 0.52
RAB40C-202ENST00000509637 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 CTC1Q2NKJ3 1217 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
RAB40C-202ENST00000509637 PABPC5Q96DU9 382 aaKnown RBP18.3■□□□□ 0.52
RAB40C-202ENST00000509637 IL17RAQ96F46 866 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 PGBD1Q96JS3 809 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 SAMD11Q96NU1 681 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 JADE2Q9NQC1 790 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 PCDHA6Q9UN73 950 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 PCDHA8Q9Y5H6 950 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 CDY2AQ9Y6F7 541 aa18.3■□□□□ 0.52
RAB40C-202ENST00000509637 LINC01565O15544 149 aa18.29■□□□□ 0.52
RAB40C-202ENST00000509637 ARP10275 920 aa18.29■□□□□ 0.52
RAB40C-202ENST00000509637 INSRRP14616 1297 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms