RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PAFAH1B1P43034 410 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 CACNB3P54284 484 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 SLC12A3P55017 1021 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 ICA1Q05084 483 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 PRR16Q569H4 304 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 KIAA0825Q8IV33 1275 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 ZBTB9Q96C00 473 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 DBNDD1Q9H9R9 158 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 TSKSQ9UJT2 592 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 FRMD3A2A2Y4 597 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 DDTLA6NHG4 134 aaPredicted RBP19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 TMEM179Q6ZVK1 233 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 ANKRD13CQ8N6S4 541 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 SPATA4Q8NEY3 305 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 MASTLQ96GX5 879 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 CRACR2AQ9BSW2 395 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 IDI2Q9BXS1 227 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 HPCAL4Q9UM19 191 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 DNM3Q9UQ16 869 aa19.77■□□□□ 0.76
CCHCR1-228ENST00000509552 POTEFA5A3E0 1075 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 SPDYE3A6NKU9 549 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 PHACTR2O75167 634 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 FOSP01100 380 aaPredicted RBP19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 POTEIP0CG38 1075 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 IKQ13123 557 aaPredicted RBP19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 Q4G0T1 1027 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 NFRKBQ6P4R8 1299 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 POTEGQ6S5H5 508 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 POTEEQ6S8J3 1075 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 GOLGA6L1Q8N7Z2 621 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 ETNPPLQ8TBG4 499 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 ARSHQ5FYA8 562 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 FBXO11Q86XK2 927 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 CATSPER3Q86XQ3 398 aa19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 ZC3H3Q8IXZ2 948 aaKnown RBP19.76■□□□□ 0.75
CCHCR1-228ENST00000509552 F5H6K3 240 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 HDLBPQ00341 1268 aaKnown RBP19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 KLRC3Q07444 240 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 ZSCAN26Q16670 478 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 MUM1L1Q5H9M0 696 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 TATDN1Q6P1N9 297 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 GOLGA5Q8TBA6 731 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 CRYGNQ8WXF5 182 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 SELENOOQ9BVL4 669 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM198AQ9UFP1 575 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 BUB1O43683 1085 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 TLR2O60603 784 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 NR2F2P24468 414 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 RPA1P27694 616 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 RAPGEF1Q13905 1077 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 SHROOM1Q2M3G4 852 aaPredicted RBP19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 STRIP1Q5VSL9 837 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 LEKR1Q6ZMV7 388 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 FAM20AQ96MK3 541 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 CWC15Q9P013 229 aaKnown RBP19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 SALL4Q9UJQ4 1053 aa19.75■□□□□ 0.75
CCHCR1-228ENST00000509552 CAPN2P17655 700 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 CXCR5P32302 372 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 ACTN2P35609 894 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 FKBP1AP62942 108 aaKnown RBP19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 SPIRE1Q08AE8 756 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 ABCB5Q2M3G0 1257 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 USH1GQ495M9 461 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 SYT2Q8N9I0 419 aaPredicted RBP19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 GMCL1P1Q8NEA9 526 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 GMCL1Q96IK5 515 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 PSMB7Q99436 277 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 KCNQ5Q9NR82 932 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 RNF40O75150 1001 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 MATR3P43243 847 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 KCNH2Q12809 1159 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 GIT2Q14161 759 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 ASIC2Q16515 512 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 SLC18A3Q16572 532 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 KLHDC7AQ5VTJ3 777 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 SIAH1Q8IUQ4 282 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 TBC1D5Q92609 795 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 LRRC1Q9BTT6 524 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 RNF14Q9UBS8 474 aa19.74■□□□□ 0.75
CCHCR1-228ENST00000509552 NCK2O43639 380 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 MYBL2P10244 700 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 SREBF1P36956 1147 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 KLHL30Q0D2K2 578 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 PABPC4Q13310 644 aaKnown RBP eCLIP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 SYDE2Q5VT97 1194 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 GSPT2Q8IYD1 628 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 ZNF622Q969S3 477 aaKnown RBP eCLIP19.73■□□□□ 0.754e-6■■□□□ 13
CCHCR1-228ENST00000509552 GDAP1L1Q96MZ0 367 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 TLR10Q9BXR5 811 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 AIPL1Q9NZN9 384 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 TRAF3IP3Q9Y228 551 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 PCDHAC2Q9Y5I4 1007 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 MYH10P35580 1976 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 CALUO43852 315 aaPredicted RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 SYF2O95926 243 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 SNAP25P60880 206 aa19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 KNOP1Q1ED39 458 aaKnown RBP19.73■□□□□ 0.75
CCHCR1-228ENST00000509552 CFAP221Q4G0U5 840 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms