RNA–Protein interactions for RNA: ENST00000509142.5

SEC31A-228, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SEC31A, Length 3,861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-228ENST00000509142 AGPSO00116 658 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 TRIM66O15016 1216 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CETN3O15182 167 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 C21orf2O43822 256 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CFBP00751 764 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 TAL1P17542 331 aaPredicted RBP12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CYP11B2P19099 503 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 KIF11P52732 1056 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 OGFOD1Q8N543 542 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 CCDC155Q8N6L0 562 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 GMCL1P1Q8NEA9 526 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 GMCL1Q96IK5 515 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 SMARCAL1Q9NZC9 954 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 MYH4Q9Y623 1939 aa12.1□□□□□ -0.47
SEC31A-228ENST00000509142 MAGEA1P43355 309 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CDK17Q00537 523 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 ENOX2Q16206 610 aaKnown RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 HYIQ5T013 277 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 MOXD1Q6UVY6 613 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CATSPER3Q86XQ3 398 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 FEZ2Q9UHY8 353 aaPredicted RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 ANKRD31Q8N7Z5 1873 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CYP3A7P24462 503 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 ACTN2P35609 894 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 C2orf54Q08AI8 447 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CREG2Q8IUH2 290 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 COG1Q8WTW3 980 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 CEP63Q96MT8 703 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 VEZTQ9HBM0 779 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 EHD2Q9NZN4 543 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 HPCAL4Q9UM19 191 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 PCDHA13Q9Y5I0 950 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 TBCAO75347 108 aaKnown RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 STAT2P52630 851 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 EHHADHQ08426 723 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 TRAF1Q13077 416 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 FAM20AQ96MK3 541 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 LSM14BQ9BX40 385 aaKnown RBP12.09□□□□□ -0.47
SEC31A-228ENST00000509142 HDAC9Q9UKV0 1011 aa12.09□□□□□ -0.47
SEC31A-228ENST00000509142 FOCADQ5VW36 1801 aa12.08□□□□□ -0.47
SEC31A-228ENST00000509142 ARID5AQ03989 594 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 LTBP1Q14766 1721 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 DLGAP5Q15398 846 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 ZYXQ15942 572 aaKnown RBP12.08□□□□□ -0.48
SEC31A-228ENST00000509142 ZNF772Q68DY9 489 aaPredicted RBP12.08□□□□□ -0.48
SEC31A-228ENST00000509142 CCDC174Q6PII3 467 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 CCDC102AQ96A19 550 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 ALS2CR12Q96Q35 445 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 PRR12Q9ULL5 1215 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 MYH7BA7E2Y1 1941 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 TBX3O15119 743 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 RAD17O75943 681 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 TUBBP07437 444 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
SEC31A-228ENST00000509142 CCDC70Q6NSX1 233 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 FGFBP2Q9BYJ0 223 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 LUC7LQ9NQ29 371 aaKnown RBP12.08□□□□□ -0.48
SEC31A-228ENST00000509142 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 FAM86B1E9PN63 330 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 FAM86B2P0C5J1 330 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 NR2F2P24468 414 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 SLC9C1Q4G0N8 1177 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 SFMBT2Q5VUG0 894 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 GOLGA5Q8TBA6 731 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 PLEKHA4Q9H4M7 779 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 FAM204AQ9H8W3 233 aa12.08□□□□□ -0.48
SEC31A-228ENST00000509142 MYH10P35580 1976 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 SLC26A4O43511 780 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 RPA1P27694 616 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 SREBF1P36956 1147 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 AARSP49588 968 aaKnown RBP eCLIP12.07□□□□□ -0.48
SEC31A-228ENST00000509142 PSMC6P62333 389 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 LARGE2Q8N3Y3 721 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 ANKRD13CQ8N6S4 541 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 SCFD1Q8WVM8 642 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.07□□□□□ -0.48
SEC31A-228ENST00000509142 GOPCQ9HD26 462 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 A0A1W2PRG0 241 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 CHMP2AO43633 222 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 ECE1P42892 770 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 RAPGEF1Q13905 1077 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 Q4G0T1 1027 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 TCERG1LQ5VWI1 586 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 IQCEQ6IPM2 695 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 LRRC31Q6UY01 552 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 NUCKS1Q9H1E3 243 aaKnown RBP12.07□□□□□ -0.48
SEC31A-228ENST00000509142 BHMT2Q9H2M3 363 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 DMGDHQ9UI17 866 aaKnown RBP12.07□□□□□ -0.48
SEC31A-228ENST00000509142 HERC5Q9UII4 1024 aaKnown RBP12.07□□□□□ -0.48
SEC31A-228ENST00000509142 ADAMTSL1Q8N6G6 1762 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 PITPNM2Q9BZ72 1349 aa12.07□□□□□ -0.48
SEC31A-228ENST00000509142 RNF40O75150 1001 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms