RNA–Protein interactions for RNA: ENST00000508385.5

SH3BP2-213, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 876 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-213ENST00000508385 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
SH3BP2-213ENST00000508385 ABHD14A-ACY1A0A1B0GW23 586 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 H3BRB1 525 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 LGALS2P05162 132 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 CCT2P78371 535 aaKnown RBP16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 MRPS9P82933 396 aaKnown RBP16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 SP4Q02446 784 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 SCRN1Q12765 414 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 STK3Q13188 491 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 CYFIP1Q7L576 1253 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 ATP6V0A1Q93050 837 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 TUT1Q9H6E5 874 aaKnown RBP16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 BCAS3Q9H6U6 928 aa16.78■□□□□ 0.28
SH3BP2-213ENST00000508385 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 KIAA1217Q5T5P2 1943 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 ST18O60284 1047 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 EFCAB14O75071 495 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 GJB5O95377 273 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 SMIM10L2AP0DMW4 78 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 SMIM10L2BP0DMW5 78 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 KCNQ1P51787 676 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 GRB10Q13322 594 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 AAK1Q2M2I8 961 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 TRAF7Q6Q0C0 670 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 USP17L6PQ6QN14 398 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 SERINC5Q86VE9 423 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 GDPD5Q8WTR4 605 aa16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 INPP4AQ96PE3 977 aaPredicted RBP16.77■□□□□ 0.28
SH3BP2-213ENST00000508385 TRANK1O15050 2925 aa16.77■□□□□ 0.27
SH3BP2-213ENST00000508385 MYH6P13533 1939 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 TTC28Q96AY4 2481 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 FRMPD4Q14CM0 1322 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 EMSYQ7Z589 1322 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 CCDC196A0A1B0GTZ2 297 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 FIBPO43427 364 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 LGR5O75473 907 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 STAM2O75886 525 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 CTSHP09668 335 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 POU3F3P20264 500 aaPredicted RBP16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 NEDD9Q14511 834 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 METTL7BQ6UX53 244 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 TRIM50Q86XT4 487 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 CCDC82Q8N4S0 544 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 NECAB1Q8N987 351 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 NECAB3Q96P71 396 aaPredicted RBP16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 RAD9AQ99638 391 aa16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 SLKQ9H2G2 1235 aaPredicted RBP16.76■□□□□ 0.27
SH3BP2-213ENST00000508385 SPATA31C2B4DYI2 1134 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 TREHO43280 583 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 IFNAR1P17181 557 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 SEMA3FQ13275 785 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.75■□□□□ 0.271e-11■■■■■ 35.9
SH3BP2-213ENST00000508385 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 DBF4BQ8NFT6 615 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 GTF3C6Q969F1 213 aa16.75■□□□□ 0.27
SH3BP2-213ENST00000508385 hCG_1642624A0A1W2PR95 340 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 AMHP03971 560 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 ICAM3P32942 547 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 PCNX4Q63HM2 1172 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 TGS1Q96RS0 853 aaKnown RBP16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 GPR20Q99678 358 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 V9GY48 417 aaPredicted RBP16.74■□□□□ 0.27
SH3BP2-213ENST00000508385 LINC01553A4QN01 128 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 MEIS2O14770 477 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 LPXNO60711 386 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 GNAT1P11488 350 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 BMP1P13497 986 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 MCM2P49736 904 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 PHKBQ93100 1093 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 HLA-CQ95604 372 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 SH2B1Q9NRF2 756 aaPredicted RBP16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 COG5Q9UP83 839 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 TELO2Q9Y4R8 837 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 TET1Q8NFU7 2136 aa16.73■□□□□ 0.27
SH3BP2-213ENST00000508385 PRPF3O43395 683 aaKnown RBP16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 DTNBO60941 627 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PPFIA3O75145 1194 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 HOXC8P31273 242 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 ARHGAP4P98171 946 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PKN1Q16512 942 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 SEPT8Q92599 483 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 SNX21Q969T3 373 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PSTPIP2Q9H939 334 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PKD2L1Q9P0L9 805 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 MYO9BQ13459 2157 aa16.72■□□□□ 0.27
SH3BP2-213ENST00000508385 PIK3CDO00329 1044 aa16.71■□□□□ 0.27
SH3BP2-213ENST00000508385 UPP2O95045 317 aa16.71■□□□□ 0.27
SH3BP2-213ENST00000508385 ERVK-21P61565 698 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms