RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 IKBKBO14920 756 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 MSH4O15457 936 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 GGPS1O95749 300 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 ACVR2BQ13705 512 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 VTI1AQ96AJ9 217 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 GPRASP2Q96D09 838 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 FAM20AQ96MK3 541 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 MAF1Q9H063 256 aa12.32□□□□□ -0.44
PROM1-207ENST00000508167 CYP3A4P08684 503 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
PROM1-207ENST00000508167 NEDD9Q14511 834 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 EPSTI1Q96J88 318 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 AP5M1Q9H0R1 490 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 MAN1B1Q9UKM7 699 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 DIS3Q9Y2L1 958 aaKnown RBP12.31□□□□□ -0.44
PROM1-207ENST00000508167 PCDHA5Q9Y5H7 936 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 LOC285556D6RIA3 1793 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 MEIS1O00470 390 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 ATP1A3P13637 1013 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 CCT6AP40227 531 aaKnown RBP12.31□□□□□ -0.44
PROM1-207ENST00000508167 ADCYAP1R1P41586 468 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 CYP4A11Q02928 519 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 MORN1Q5T089 497 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 PDXDC2PQ6P474 469 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 GLG1Q92896 1179 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 PDGFCQ9NRA1 345 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 TBC1D22BQ9NU19 505 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 DNAJC25-GNG10A0A024R161 153 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 POTEMA6NI47 508 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 DPYDQ12882 1025 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 LY6KQ17RY6 165 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 UTP14CQ5TAP6 766 aaKnown RBP12.31□□□□□ -0.44
PROM1-207ENST00000508167 KCNV1Q6PIU1 500 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 MOXD1Q6UVY6 613 aa12.31□□□□□ -0.44
PROM1-207ENST00000508167 MAFGO15525 162 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 DYNC1LI2O43237 492 aaPredicted RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 MSNP26038 577 aaKnown RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 TNFAIP2Q03169 654 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 SLC9C1Q4G0N8 1177 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 AZI2Q9H6S1 392 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 VTA1Q9NP79 307 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 PARP14Q460N5 1801 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 GNRH1P01148 92 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 CTGFP29279 349 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 CIITAP33076 1130 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 ARMCX5Q6P1M9 558 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 TPH2Q8IWU9 490 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 SPATA33Q96N06 139 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 CD44P16070 742 aaKnown RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 TMEM139Q8IV31 216 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
PROM1-207ENST00000508167 SERTAD1Q9UHV2 236 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 FAM184BQ9ULE4 1060 aa12.3□□□□□ -0.44
PROM1-207ENST00000508167 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 GRK4P32298 578 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 Q4G0T1 1027 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 HAUS3Q68CZ6 603 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 DNAJC5GQ8N7S2 189 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 GIMAP8Q8ND71 665 aaPredicted RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 BIN1O00499 593 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
PROM1-207ENST00000508167 CUL4BQ13620 913 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 NAALADL2Q58DX5 795 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 OTOP1Q7RTM1 612 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 TRMT44Q8IYL2 757 aaKnown RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 INPP4AQ96PE3 977 aaPredicted RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 TMX1Q9H3N1 280 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 SLC9A2Q9UBY0 812 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 RPTORQ8N122 1335 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 COL11A1P12107 1806 aaPredicted RBP12.29□□□□□ -0.44
PROM1-207ENST00000508167 CABP7Q86V35 215 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 OR6J1Q8NGC5 347 aa12.29□□□□□ -0.44
PROM1-207ENST00000508167 PP2D1A8MPX8 630 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 TBX3O15119 743 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 FANCGO15287 622 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 ATP9AO75110 1047 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 KRT18P05783 430 aaKnown RBP12.28□□□□□ -0.44
PROM1-207ENST00000508167 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
PROM1-207ENST00000508167 GHRHRQ02643 423 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 ZNF467Q7Z7K2 595 aaPredicted RBP12.28□□□□□ -0.44
PROM1-207ENST00000508167 COPS5Q92905 334 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 DHX58Q96C10 678 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 PTCH2Q9Y6C5 1203 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 POLR2DO15514 142 aaKnown RBP12.28□□□□□ -0.44
PROM1-207ENST00000508167 GH1P01241 217 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 HMGCRP04035 888 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 TGFB3P10600 412 aa12.28□□□□□ -0.44
PROM1-207ENST00000508167 LONP1P36776 959 aaKnown RBP12.28□□□□□ -0.44
PROM1-207ENST00000508167 KRT76Q01546 638 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms