RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 RC3H2Q9HBD1 1191 aaKnown RBP10.69□□□□□ -0.7
CAST-220ENST00000508117 COL20A1Q9P218 1284 aa10.69□□□□□ -0.7
CAST-220ENST00000508117 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
CAST-220ENST00000508117 TTC3P53804 2025 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 MYH6P13533 1939 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 C17orf102A2RUQ5 167 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 GRM6O15303 877 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 UPP2O95045 317 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 NR3C2P08235 984 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 TGFB3P10600 412 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 PCP11498 1178 aaKnown RBP10.68□□□□□ -0.7
CAST-220ENST00000508117 GHRHRQ02643 423 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 COASYQ13057 564 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 CLUL1Q15846 466 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 USH1GQ495M9 461 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 NAALADL2Q58DX5 795 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 FAM26DQ5JW98 314 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 CELF3Q5SZQ8 465 aaKnown RBP10.68□□□□□ -0.7
CAST-220ENST00000508117 SMRP1Q8NCR6 262 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 TBC1D5Q92609 795 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 ATP6V0A1Q93050 837 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 P2RX5Q93086 422 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 PPP2R3CQ969Q6 453 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 PLXNA3P51805 1871 aa10.68□□□□□ -0.7
CAST-220ENST00000508117 ADGRA3Q8IWK6 1321 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 HSDL1Q3SXM5 330 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 ARHGEF16Q5VV41 709 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 TSHZ3Q63HK5 1081 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 ERMP1Q7Z2K6 904 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 FSD1Q9BTV5 496 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 PXMP2Q9NR77 195 aa10.67□□□□□ -0.7
CAST-220ENST00000508117 MAP3K20Q9NYL2 800 aaKnown RBP10.67□□□□□ -0.7
CAST-220ENST00000508117 H3BRB1 525 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 TREHO43280 583 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 RGS20O76081 388 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 HSPD1P10809 573 aaKnown RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 GNAT1P11488 350 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 EIF2AK2P19525 551 aaKnown RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 AVPR2P30518 371 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 GTF2F1P35269 517 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAST-220ENST00000508117 NT5C2P49902 561 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 HSD17B4P51659 736 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 LSM11P83369 360 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAST-220ENST00000508117 CAMK1Q14012 370 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 DSG2Q14126 1118 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 CDC37Q16543 378 aaPredicted RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 EFHBQ8N7U6 833 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 PI4K2BQ8TCG2 481 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 ZNF689Q96CS4 500 aaPredicted RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 ASIC4Q96FT7 647 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 SPATA33Q96N06 139 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 PHF7Q9BWX1 381 aaPredicted RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 RNPEPQ9H4A4 650 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 TUT1Q9H6E5 874 aaKnown RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 CLEC1BQ9P126 229 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 PLAGL2Q9UPG8 496 aa10.66□□□□□ -0.7
CAST-220ENST00000508117 MRPL11Q9Y3B7 192 aaKnown RBP10.66□□□□□ -0.7
CAST-220ENST00000508117 KAT6AQ92794 2004 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 ZMYM6O95789 1325 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 LINC01565O15544 149 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 GGPS1O95749 300 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 SMIM10L2AP0DMW4 78 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 SMIM10L2BP0DMW5 78 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 ATF7P17544 494 aaPredicted RBP10.65□□□□□ -0.7
CAST-220ENST00000508117 ICAM3P32942 547 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 NDUFV1P49821 464 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 VCPP55072 806 aaKnown RBP10.65□□□□□ -0.7
CAST-220ENST00000508117 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.7
CAST-220ENST00000508117 ADAM17P78536 824 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 STOX1Q6ZVD7 989 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 VSIG10LQ86VR7 867 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 DGKHQ86XP1 1220 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 TICAM2Q86XR7 235 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 PTCD2Q8WV60 388 aaKnown RBP10.65□□□□□ -0.7
CAST-220ENST00000508117 ATOH1Q92858 354 aaPredicted RBP10.65□□□□□ -0.7
CAST-220ENST00000508117 PDCD2LQ9BRP1 358 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 USP26Q9BXU7 913 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 OSBPL7Q9BZF2 842 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 IGFLR1Q9H665 355 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 EHMT1Q9H9B1 1298 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 TOMM22Q9NS69 142 aa10.65□□□□□ -0.7
CAST-220ENST00000508117 FSD2A1L4K1 749 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 DGKIO75912 1065 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 FGAP02671 866 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 LGALS2P05162 132 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 CTSHP09668 335 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 UBA1P22314 1058 aaKnown RBP10.64□□□□□ -0.71
CAST-220ENST00000508117 RRP12Q5JTH9 1297 aaKnown RBP10.64□□□□□ -0.71
CAST-220ENST00000508117 VPS53Q5VIR6 699 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 ADGRF4Q8IZF3 695 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 UBA5Q9GZZ9 404 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 HELLSQ9NRZ9 838 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 FAM86C1Q9NVL1 165 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 GVINP1Q7Z2Y8 2422 aa10.64□□□□□ -0.71
CAST-220ENST00000508117 CCDC171Q6TFL3 1326 aa10.63□□□□□ -0.71
CAST-220ENST00000508117 RBAK-RBAKDNI3L0D1 243 aa10.63□□□□□ -0.71
CAST-220ENST00000508117 GOLGA8HP0CJ92 632 aa10.63□□□□□ -0.71
CAST-220ENST00000508117 NBL1P41271 181 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms