RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 MMP1P03956 469 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 CTSHP09668 335 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 MGAT3Q09327 533 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 SMAD4Q13485 552 aaKnown RBP19.07■□□□□ 0.64
SNF8-205ENST00000507302 LMBR1Q8WVP7 490 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 MSLNLQ96KJ4 702 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 KRT23Q9C075 422 aa19.07■□□□□ 0.64
SNF8-205ENST00000507302 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
SNF8-205ENST00000507302 BAZ2BQ9UIF8 2168 aaKnown RBP19.07■□□□□ 0.64
SNF8-205ENST00000507302 KMT2EQ8IZD2 1858 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 TRIM6-TRIM34B2RNG4 842 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 GCOM1H8Y6P7 765 aaPredicted RBP19.06■□□□□ 0.64
SNF8-205ENST00000507302 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 CTNNB1P35222 781 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 TRAF1Q13077 416 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 ADAM15Q13444 863 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 NEDD9Q14511 834 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 RNF135Q8IUD6 432 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 EDAQ92838 391 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 SENP7Q9BQF6 1050 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 PLVAPQ9BX97 442 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 CNNM2Q9H8M5 875 aa19.06■□□□□ 0.64
SNF8-205ENST00000507302 NRCAMQ92823 1304 aa19.05■□□□□ 0.64
SNF8-205ENST00000507302 GNPTABQ3T906 1256 aa19.05■□□□□ 0.64
SNF8-205ENST00000507302 IFIT1BQ5T764 474 aaKnown RBP19.05■□□□□ 0.64
SNF8-205ENST00000507302 P2RX5Q93086 422 aa19.05■□□□□ 0.64
SNF8-205ENST00000507302 ZFP91Q96JP5 570 aaPredicted RBP19.05■□□□□ 0.64
SNF8-205ENST00000507302 MUTYHQ9UIF7 546 aa19.05■□□□□ 0.64
SNF8-205ENST00000507302 NOP56O00567 594 aaKnown RBP19.04■□□□□ 0.64
SNF8-205ENST00000507302 ENPP3O14638 875 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 FIBPO43427 364 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 CYTH3O43739 400 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 DGKIO75912 1065 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 IMMTQ16891 758 aaKnown RBP19.04■□□□□ 0.64
SNF8-205ENST00000507302 CYFIP1Q7L576 1253 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 TRIM50Q86XT4 487 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 RILPL2Q969X0 211 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 UBAC1Q9BSL1 405 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 ZNF215Q9UL58 517 aaPredicted RBP19.04■□□□□ 0.64
SNF8-205ENST00000507302 TELO2Q9Y4R8 837 aa19.04■□□□□ 0.64
SNF8-205ENST00000507302 MBLAC1A4D2B0 266 aaPredicted RBP19.03■□□□□ 0.64
SNF8-205ENST00000507302 GTF2F1P35269 517 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNF8-205ENST00000507302 LPIN1Q14693 890 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 CBX2Q14781 532 aaPredicted RBP19.03■□□□□ 0.64
SNF8-205ENST00000507302 GRM4Q14833 912 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 NAALADL2Q58DX5 795 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 TAF2Q6P1X5 1199 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 EP400NLQ6ZTU2 488 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 PIGSQ96S52 555 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 ALG13Q9NP73 1137 aaKnown RBP19.03■□□□□ 0.64
SNF8-205ENST00000507302 CD207Q9UJ71 328 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 PLAGL2Q9UPG8 496 aa19.03■□□□□ 0.64
SNF8-205ENST00000507302 PNMA6FA0A0J9YX94 578 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 LOC730098B7Z3J9 87 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 LINC01565O15544 149 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 PKN1Q16512 942 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 CWC27Q6UX04 472 aaKnown RBP19.02■□□□□ 0.64
SNF8-205ENST00000507302 CYB5R4Q7L1T6 521 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 FCHSD1Q86WN1 690 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 PLEKHM2Q8IWE5 1019 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 PRSS33Q8NF86 280 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 CLEC1BQ9P126 229 aa19.02■□□□□ 0.64
SNF8-205ENST00000507302 ZDBF2Q9HCK1 2354 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 STXBP3O00186 592 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 GHRP10912 638 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 ARHGAP4P98171 946 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 COASYQ13057 564 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 CLUL1Q15846 466 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 FBXO47Q5MNV8 452 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 MARCH8Q5T0T0 291 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 PCNX4Q63HM2 1172 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 XRRA1Q6P2D8 792 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 RUFY4Q6ZNE9 571 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 EFHBQ8N7U6 833 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 SMRP1Q8NCR6 262 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 PHOX2BQ99453 314 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 LNPKQ9C0E8 428 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 SUPT16HQ9Y5B9 1047 aaKnown RBP19.01■□□□□ 0.63
SNF8-205ENST00000507302 SQORQ9Y6N5 450 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 PLXNA4Q9HCM2 1894 aa19.01■□□□□ 0.63
SNF8-205ENST00000507302 LOXHD1Q8IVV2 1947 aa19■□□□□ 0.63
SNF8-205ENST00000507302 DNAJB1P25685 340 aa19■□□□□ 0.63
SNF8-205ENST00000507302 TROAPQ12815 778 aa19■□□□□ 0.63
SNF8-205ENST00000507302 BTG3Q14201 252 aaPredicted RBP19■□□□□ 0.63
SNF8-205ENST00000507302 TRIM67Q6ZTA4 783 aa19■□□□□ 0.63
SNF8-205ENST00000507302 CMTR2Q8IYT2 770 aaKnown RBP19■□□□□ 0.63
SNF8-205ENST00000507302 SPPL3Q8TCT6 385 aa19■□□□□ 0.63
SNF8-205ENST00000507302 LINC01599Q8WXQ3 324 aa19■□□□□ 0.63
SNF8-205ENST00000507302 SNX27Q96L92 541 aa19■□□□□ 0.63
SNF8-205ENST00000507302 CACNA1HO95180 2353 aa19■□□□□ 0.63
SNF8-205ENST00000507302 CFAP54Q96N23 3096 aa19■□□□□ 0.63
SNF8-205ENST00000507302 HIP1O00291 1037 aa18.99■□□□□ 0.63
SNF8-205ENST00000507302 PIK3CDO00329 1044 aa18.99■□□□□ 0.63
SNF8-205ENST00000507302 ITGB1P05556 798 aa18.99■□□□□ 0.63
SNF8-205ENST00000507302 TSHZ1Q6ZSZ6 1077 aa18.99■□□□□ 0.63
SNF8-205ENST00000507302 RTN4RL1Q86UN2 441 aaPredicted RBP18.99■□□□□ 0.63
SNF8-205ENST00000507302 HOMER1Q86YM7 354 aa18.99■□□□□ 0.63
SNF8-205ENST00000507302 GIMAP8Q8ND71 665 aaPredicted RBP18.99■□□□□ 0.63
SNF8-205ENST00000507302 PRRX2Q99811 253 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms