RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 RC3H2Q9HBD1 1191 aaKnown RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 ARPP21Q9UBL0 812 aaPredicted RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 RALGAPA2Q2PPJ7 1873 aa8.53□□□□□ -1.04
VCAN-207ENST00000507162 GCN1Q92616 2671 aaKnown RBP8.53□□□□□ -1.04
VCAN-207ENST00000507162 FSD2A1L4K1 749 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 PLA2G6O60733 806 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 ZIC2O95409 532 aaPredicted RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 F2P00734 622 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 CHGBP05060 677 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 DCNP07585 359 aaKnown RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 TSPY3P0CV98 308 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 TSPY8P0CW00 308 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 HOXB8P17481 243 aaPredicted RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 ADD2P35612 726 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 ATP8B2P98198 1209 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 LMNB2Q03252 620 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 APOBRQ0VD83 1088 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 LAMC2Q13753 1193 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 CCDC96Q2M329 555 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 PLPP4Q5VZY2 271 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 TTBK2Q6IQ55 1244 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 TMEM184AQ6ZMB5 413 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 ZDHHC14Q8IZN3 488 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 CLEC4DQ8WXI8 215 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 SECISBP2LQ93073 1101 aaKnown RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 GMCL1Q96IK5 515 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 NECTIN4Q96NY8 510 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 TMEM260Q9NX78 707 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 DBR1Q9UK59 544 aaKnown RBP8.52□□□□□ -1.05
VCAN-207ENST00000507162 SYNPO2Q9UMS6 1093 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 PCDHB12Q9Y5F1 795 aa8.52□□□□□ -1.05
VCAN-207ENST00000507162 MAST4O15021 2626 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 PPFIA4O75335 1185 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 SMIM10L2AP0DMW4 78 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 SMIM10L2BP0DMW5 78 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 MTHFRP42898 656 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 GATMP50440 423 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 TFAP4Q01664 338 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 TDGQ13569 410 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 STXBP2Q15833 593 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 SBK1Q52WX2 424 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 RASGRP2Q7LDG7 609 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 C1orf210Q8IVY1 113 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 CMTR2Q8IYT2 770 aaKnown RBP8.51□□□□□ -1.05
VCAN-207ENST00000507162 PPTC7Q8NI37 304 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 SSH3Q8TE77 659 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 TAAR1Q96RJ0 339 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.51□□□□□ -1.05
VCAN-207ENST00000507162 ADAM7Q9H2U9 754 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 RNPEPQ9H4A4 650 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 ZNF287Q9HBT7 754 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 CYP26B1Q9NR63 512 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 DDX41Q9UJV9 622 aaKnown RBP8.51□□□□□ -1.05
VCAN-207ENST00000507162 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 MRVI1Q9Y6F6 885 aa8.51□□□□□ -1.05
VCAN-207ENST00000507162 CAND2O75155 1236 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 FGF18O76093 207 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 CHRNA1P02708 482 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 CFHP08603 1231 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 ITIH3Q06033 890 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 TBC1D8BQ0IIM8 1120 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 ATAT1Q5SQI0 421 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 RARS2Q5T160 578 aaKnown RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 THNSL1Q8IYQ7 743 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 FAM9BQ8IZU0 186 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 C12orf76Q8N812 135 aaPredicted RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 NEDD1Q8NHV4 660 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 CASP10Q92851 521 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 SPATA33Q96N06 139 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 PHF12Q96QT6 1004 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 PUS7LQ9H0K6 701 aaKnown RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 RANBP17Q9H2T7 1088 aaKnown RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 IL1RAPL2Q9NP60 686 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 SETD4Q9NVD3 440 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 LRFN2Q9ULH4 789 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
VCAN-207ENST00000507162 ZBED9Q6R2W3 1325 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 UNC79Q9P2D8 2635 aa8.5□□□□□ -1.05
VCAN-207ENST00000507162 MYH4Q9Y623 1939 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 HIDE1A8MVS5 230 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 H3BRB1 525 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 APPP05067 770 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 STAG3L1P0CL83 205 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 C7P10643 843 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 GNAT1P11488 350 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 CA8P35219 290 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 UBE3AQ05086 875 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 KCNC3Q14003 757 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 LPIN1Q14693 890 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 FAM26DQ5JW98 314 aa8.49□□□□□ -1.05
VCAN-207ENST00000507162 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms