RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 SEC23AQ15436 765 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 KCNA10Q16322 511 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 CREB3L3Q68CJ9 461 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 CDCA2Q69YH5 1023 aaPredicted RBP4.23□□□□□ -1.73
GYPB-207ENST00000506679 KIF18BQ86Y91 864 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 THNSL2Q86YJ6 484 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 PPM1KQ8N3J5 372 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 CHST14Q8NCH0 376 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 SMARCC2Q8TAQ2 1214 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 TOE1Q96GM8 510 aaKnown RBP4.23□□□□□ -1.73
GYPB-207ENST00000506679 B4GALT6Q9UBX8 382 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 WASF3Q9UPY6 502 aa4.23□□□□□ -1.73
GYPB-207ENST00000506679 PDE8AO60658 829 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 C4BPAP04003 597 aaKnown RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 VIL1P09327 827 aaKnown RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 CYP2C8P10632 490 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 PTPN1P18031 435 aaKnown RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 PI3P19957 117 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 THBS2P35442 1172 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 FLT3P36888 993 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 STAT5AP42229 794 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 RAP1GAPP47736 663 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 LIMS1P48059 325 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 ITGA1P56199 1179 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 DLX2Q07687 328 aaPredicted RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 ZNF124Q15973 351 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 ARHGAP44Q17R89 818 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 VWA3BQ502W6 1294 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 PAN2Q504Q3 1202 aaKnown RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 PIK3R6Q5UE93 754 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 UBE2R2Q712K3 238 aaPredicted RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 RNF180Q86T96 592 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 ZC3H18Q86VM9 953 aaKnown RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 DLG3Q92796 817 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 DACT3Q96B18 629 aaPredicted RBP4.22□□□□□ -1.73
GYPB-207ENST00000506679 GORASP1Q9BQQ3 440 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 PCDH18Q9HCL0 1135 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 MAPRE3Q9UPY8 281 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 KCTD3Q9Y597 815 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 B3GALT1Q9Y5Z6 326 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 ATP23Q9Y6H3 246 aa4.22□□□□□ -1.73
GYPB-207ENST00000506679 SLC12A8A0AV02 714 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 NPIPB6E9PJ23 425 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 KCNK3O14649 394 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 KRT15P19012 456 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 SDHAP31040 664 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 STAT3P40763 770 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 MASP1P48740 699 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 HERVK_113P62684 666 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 NKX3-2P78367 333 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 DSG1Q02413 1049 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 GRIN1Q05586 938 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 ADAM9Q13443 819 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 PCBP1Q15365 356 aaKnown RBP eCLIP4.21□□□□□ -1.742e-29■■■■■ 27.7
GYPB-207ENST00000506679 SEPT7Q16181 437 aaKnown RBP4.21□□□□□ -1.74
GYPB-207ENST00000506679 PKN1Q16512 942 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 CFAP100Q494V2 611 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 TAF7LQ5H9L4 462 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 CD276Q5ZPR3 534 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 PKN3Q6P5Z2 889 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 CD300LDQ6UXZ3 194 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 LIPIQ6XZB0 460 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 C1QL4Q86Z23 238 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 AHI1Q8N157 1196 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 C2orf69Q8N8R5 385 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 DTX3Q8N9I9 347 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 FNIP1Q8TF40 1166 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 DDX11Q96FC9 970 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 WNK4Q96J92 1243 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 NOX5Q96PH1 765 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 SYT3Q9BQG1 590 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 C11orf84Q9BUA3 381 aaPredicted RBP4.21□□□□□ -1.74
GYPB-207ENST00000506679 BOCQ9BWV1 1114 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 SLKQ9H2G2 1235 aaPredicted RBP4.21□□□□□ -1.74
GYPB-207ENST00000506679 TMX1Q9H3N1 280 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 CNOT6Q9ULM6 557 aaKnown RBP4.21□□□□□ -1.74
GYPB-207ENST00000506679 FAN1Q9Y2M0 1017 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 PRKAB1Q9Y478 270 aa4.21□□□□□ -1.74
GYPB-207ENST00000506679 SBNO2Q9Y2G9 1366 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.2□□□□□ -1.74
GYPB-207ENST00000506679 DBX1A6NMT0 343 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 RFXAPO00287 272 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 DVL2O14641 736 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 KPNA6O60684 536 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 F2P00734 622 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 MYCLP1P12525 358 aaPredicted RBP4.2□□□□□ -1.74
GYPB-207ENST00000506679 AOAHP28039 575 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 IRF9Q00978 393 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 DBPQ10586 325 aaPredicted RBP4.2□□□□□ -1.74
GYPB-207ENST00000506679 ZNF385BQ569K4 471 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 PRR31Q5SQ13 230 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 BTBD8Q5XKL5 378 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 CPZQ66K79 652 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 CNNM4Q6P4Q7 775 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 CNKSR3Q6P9H4 555 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 KRT26Q7Z3Y9 468 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 SAPCD2Q86UD0 394 aa4.2□□□□□ -1.74
GYPB-207ENST00000506679 YIPF4Q9BSR8 244 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms