RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 YBX2Q9Y2T7 364 aaKnown RBP10.39□□□□□ -0.75
PDLIM5-209ENST00000506632 CHD9Q3L8U1 2897 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 MYO9BQ13459 2157 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 GSTTP1A0A1W2PQM5 241 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 C17orf102A2RUQ5 167 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 ZBBXA8MT70 800 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PRPF3O43395 683 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 GTPBP6O43824 516 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 BAIAP3O94812 1187 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 ATP2A2P16615 1042 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 IFNAR1P17181 557 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PDIA3P30101 505 aaKnown RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 TCF7P36402 384 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 TOB2Q14106 344 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 ZNF618Q5T7W0 954 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 RUFY3Q7L099 469 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 CYP2W1Q8TAV3 490 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PHOSPHO2Q8TCD6 241 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 SEPT1Q8WYJ6 367 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PGBD1Q96JS3 809 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 SLC9A7Q96T83 725 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 MXRA8Q9BRK3 442 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 ZMYND12Q9H0C1 365 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 NKX2-4Q9H2Z4 354 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 KCNH7Q9NS40 1196 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 MSRAQ9UJ68 235 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 NAP1L2Q9ULW6 460 aaPredicted RBP10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PCDHA11Q9Y5I1 949 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 PTPRSQ13332 1948 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 CUL9Q8IWT3 2517 aa10.38□□□□□ -0.75
PDLIM5-209ENST00000506632 CDH23Q9H251 3354 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 NFASCO94856 1347 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 MEIS1O00470 390 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 ADAMTS3O15072 1205 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 TREHO43280 583 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 CAND2O75155 1236 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 FOSL2P15408 326 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 RABGGTBP53611 331 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 SP4Q02446 784 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 GSE1Q14687 1217 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 CEP55Q53EZ4 464 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 CNKSR3Q6P9H4 555 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 NIPA1Q7RTP0 329 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 MAFAQ8NHW3 353 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 ATP6V0A1Q93050 837 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 RNF26Q9BY78 433 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 FTOQ9C0B1 505 aaKnown RBP eCLIP10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 SETD4Q9NVD3 440 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 TMEM260Q9NX78 707 aa10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 ZNF215Q9UL58 517 aaPredicted RBP10.37□□□□□ -0.75
PDLIM5-209ENST00000506632 EMSYQ7Z589 1322 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 IGLV3-22A0A075B6J6 115 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 LGR5O75473 907 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 CYP3A4P08684 503 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 ARP10275 920 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 GNAT1P11488 350 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 MYOGP15173 224 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 WDR5P61964 334 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 ARHGAP4P98171 946 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 ITGB3BPQ13352 177 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 HERC6Q8IVU3 1022 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 LMBR1Q8WVP7 490 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 PHKBQ93100 1093 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 PCYT2Q99447 389 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 SLC28A3Q9HAS3 691 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 NCOA5Q9HCD5 579 aaKnown RBP10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 JPH1Q9HDC5 661 aaPredicted RBP10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 PKD2L1Q9P0L9 805 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 SLC9A2Q9UBY0 812 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 CYP46A1Q9Y6A2 500 aa10.36□□□□□ -0.75
PDLIM5-209ENST00000506632 NRCAMQ92823 1304 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 ABHD14A-ACY1A0A1B0GW23 586 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 MBLAC1A4D2B0 266 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 RSPH10B2B2RC85 870 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 FAM86B1E9PN63 330 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 RBAK-RBAKDNI3L0D1 243 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 ATG7O95352 703 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 FAM86B2P0C5J1 330 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 RSPH10BP0C881 870 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 THPOP40225 353 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 CCT2P78371 535 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 FAM26DQ5JW98 314 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 JAKMIP3Q5VZ66 844 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 MCTP2Q6DN12 878 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 RPAINQ86UA6 219 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 REXO1Q8N1G1 1221 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 IL17RAQ96F46 866 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 ZNF274Q96GC6 653 aaPredicted RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 OSBPL7Q9BZF2 842 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 UPF3BQ9BZI7 483 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 SMARCAD1Q9H4L7 1026 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 PRDM12Q9H4Q4 367 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 AGO4Q9HCK5 861 aaKnown RBP10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 C6orf50Q9HD87 102 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 ERAP1Q9NZ08 941 aa10.35□□□□□ -0.75
PDLIM5-209ENST00000506632 MICAL3Q7RTP6 2002 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms