RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 SPATA31C2B4DYI2 1134 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 GTPBP6O43824 516 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-209ENST00000506630 KPNA6O60684 536 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 CTDNEP1O95476 244 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
TCOF1-209ENST00000506630 ITGB5P18084 799 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 SREBF1P36956 1147 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 CHMP4BP1P59074 171 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 ARHGAP4P98171 946 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 MTMR1Q13613 665 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 NEDD9Q14511 834 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 RABEP1Q15276 862 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 DGKDQ16760 1214 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 MCTP2Q6DN12 878 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 CYFIP1Q7L576 1253 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 GPRASP2Q96D09 838 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 VWCEQ96DN2 955 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 CDHR1Q96JP9 859 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 NECAB3Q96P71 396 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-209ENST00000506630 PKD2L1Q9P0L9 805 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 ORC3Q9UBD5 711 aaPredicted RBP14.95□□□□□ -0.02
TCOF1-209ENST00000506630 UBIAD1Q9Y5Z9 338 aa14.95□□□□□ -0.02
TCOF1-209ENST00000506630 NOP56O00567 594 aaKnown RBP14.94□□□□□ -0.02
TCOF1-209ENST00000506630 B4GALT4O60513 344 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 PFKMP08237 780 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 ZNF286BP0CG31 522 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 XBP1P17861 261 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 ZNF76P36508 570 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 TFF2Q03403 129 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 HSDL1Q3SXM5 330 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 CCDC83Q8IWF9 413 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 WASF1Q92558 559 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 MXRA8Q9BRK3 442 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 WNT8AQ9H1J5 351 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 BCAS3Q9H6U6 928 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 JADE2Q9NQC1 790 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 PCDHA4Q9UN74 947 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 TANC1Q9C0D5 1861 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 MYO9BQ13459 2157 aa14.94□□□□□ -0.02
TCOF1-209ENST00000506630 JAK2O60674 1132 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 SUPT20HL2P0C7V6 817 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 MYOGP15173 224 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 SP4Q02446 784 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 ST3GAL1Q11201 340 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 CEP55Q53EZ4 464 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 FAM47CQ5HY64 1035 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 METTL7BQ6UX53 244 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 BLIDQ8IZY5 108 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 GIMAP8Q8ND71 665 aaPredicted RBP14.93□□□□□ -0.02
TCOF1-209ENST00000506630 NSUN7Q8NE18 718 aaKnown RBP14.93□□□□□ -0.02
TCOF1-209ENST00000506630 SCLYQ96I15 445 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 TBC1D32Q96NH3 1257 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 SENP7Q9BQF6 1050 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 ALG1Q9BT22 464 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 KCNJ14Q9UNX9 436 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
TCOF1-209ENST00000506630 MUC3AQ02505 3323 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 ST18O60284 1047 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 ATP9AO75110 1047 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 ACTN1P12814 892 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 KCNA2P16389 499 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 KCNQ1P51787 676 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 FOSBP53539 338 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 NBPF20Q3BBV1 942 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 FAM177A1Q8N128 213 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-209ENST00000506630 DAGLBQ8NCG7 672 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 CYP2W1Q8TAV3 490 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 ZSCAN31Q96LW9 406 aaPredicted RBP14.92□□□□□ -0.02
TCOF1-209ENST00000506630 KATNAL1Q9BW62 490 aa14.92□□□□□ -0.02
TCOF1-209ENST00000506630 NCOR1O75376 2440 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 MAFGO15525 162 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 CA3P07451 260 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 FDPSP14324 419 aaKnown RBP14.91□□□□□ -0.02
TCOF1-209ENST00000506630 POU3F3P20264 500 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-209ENST00000506630 PSEN2P49810 448 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 GALNT17Q6IS24 598 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 PLA2G4DQ86XP0 818 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 KAT2BQ92831 832 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 PHF20Q9BVI0 1012 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 BACH2Q9BYV9 841 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 SH2B1Q9NRF2 756 aaPredicted RBP14.91□□□□□ -0.02
TCOF1-209ENST00000506630 KCNH7Q9NS40 1196 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 GJB4Q9NTQ9 266 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 TRMT13Q9NUP7 481 aaKnown RBP14.91□□□□□ -0.02
TCOF1-209ENST00000506630 COG5Q9UP83 839 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 HCN4Q9Y3Q4 1203 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 MTCH2Q9Y6C9 303 aa14.91□□□□□ -0.02
TCOF1-209ENST00000506630 PPFIA4O75335 1185 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 F2P00734 622 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 LGALS2P05162 132 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 CYP3A4P08684 503 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 ARP10275 920 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 CYP2C9P11712 490 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 HOXD8P13378 290 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 SETQ01105 290 aaPredicted RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 MFSD10Q14728 455 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 NPY5RQ15761 445 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 KIAA0753Q2KHM9 967 aa14.9□□□□□ -0.02
TCOF1-209ENST00000506630 UTP14CQ5TAP6 766 aaKnown RBP14.9□□□□□ -0.02
TCOF1-209ENST00000506630 NFRKBQ6P4R8 1299 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms