RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 ZNF536O15090 1300 aa2.55□□□□□ -2
NEDD4-205ENST00000506154 VSTM5A8MXK1 200 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 DCDC2CA8MYV0 355 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SNAP23O00161 211 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 DDX3YO15523 660 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 TTI1O43156 1089 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 STRNO43815 780 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 MTRF1O75570 445 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 CD2BP2O95400 341 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 FGAP02671 866 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PTPN2P17706 415 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CSTF2P33240 577 aaKnown RBP eCLIP2.54□□□□□ -2
NEDD4-205ENST00000506154 HSPA1LP34931 641 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 IARSP41252 1262 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 MAPK9P45984 424 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 GJA8P48165 433 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ZNF460Q14592 562 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 RRS1Q15050 365 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 MRPL10Q7Z7H8 261 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 SESTD1Q86VW0 696 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ENOX1Q8TC92 643 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 RHPN1Q8TCX5 695 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 FBXL18Q96ME1 805 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ALS2CR12Q96Q35 445 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 BPIFA3Q9BQP9 254 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CFHR5Q9BXR6 569 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 MAK16Q9BXY0 300 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 TSGA10Q9BZW7 698 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TMEM39AQ9NV64 488 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SWAP70Q9UH65 585 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ADAMTS1Q9UHI8 967 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NSFL1CQ9UNZ2 370 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 TNNQ9UQP3 1299 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TMED5Q9Y3A6 229 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ROBO3Q96MS0 1386 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 AOX1Q06278 1338 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 GPR25O00155 361 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 OLFM2O95897 454 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 EGFRP00533 1210 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 IVLP07476 585 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 FGRP09769 529 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 RXRAP19793 462 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ITPK1Q13572 414 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 BLMHQ13867 455 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PTPN21Q16825 1174 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 LYPD8Q6UX82 237 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TMC4Q7Z404 712 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CCDC170Q8IYT3 715 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 HAPLN3Q96S86 360 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 GOLPH3LQ9H4A5 285 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 COMMD8Q9NX08 183 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 MAP3K20Q9NYL2 800 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 ZMAT5Q9UDW3 170 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 DDX20Q9UHI6 824 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 ITGB1BP2Q9UKP3 347 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TACC3Q9Y6A5 838 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NUMBLQ9Y6R0 609 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 SHTN1A0MZ66 631 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 KIF5CO60282 957 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PHACTR2O75167 634 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NPTXRO95502 500 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PF4P02776 101 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 HOXB3P14651 431 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 KCNA3P22001 575 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CCND1P24385 295 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TARSP26639 723 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 OXCT1P55809 520 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 DAB2P98082 770 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 HSPA14Q0VDF9 509 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 STIM1Q13586 685 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 BYSLQ13895 437 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 CNGA3Q16281 694 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 COBLL1Q53SF7 1204 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ESCO1Q5FWF5 840 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 C10orf67Q8IYJ2 551 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ZNF384Q8TF68 577 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PIGBQ92521 554 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 RTFDC1Q9BY42 306 aaPredicted RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 PUS3Q9BZE2 481 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 ARMT1Q9H993 441 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TCF7L2Q9NQB0 619 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ATP8A2Q9NTI2 1148 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PCDHGA11Q9Y5H2 935 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 MYPNQ86TC9 1320 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 CCDC162PA2VCL2 907 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PRSS47A8MTI9 375 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 KCNQ3O43525 872 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NR3C2P08235 984 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TRIM27P14373 513 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 VARSP26640 1264 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 TBX4P57082 545 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ATP11AP98196 1134 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 ELF2Q15723 593 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 TIGD6Q17RP2 521 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 BOLA3Q53S33 107 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 NDUFAF5Q5TEU4 345 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PRPF38BQ5VTL8 546 aaKnown RBP2.54□□□□□ -2
NEDD4-205ENST00000506154 EGFLAMQ63HQ2 1017 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 C1orf228Q6PIY5 440 aa2.54□□□□□ -2
NEDD4-205ENST00000506154 PLA2G4DQ86XP0 818 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms