RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 TOE1Q96GM8 510 aaKnown RBP5.75□□□□□ -1.49
TOPBP1-204ENST00000505804 SYT3Q9BQG1 590 aa5.75□□□□□ -1.49
TOPBP1-204ENST00000505804 ORAI3Q9BRQ5 295 aa5.75□□□□□ -1.49
TOPBP1-204ENST00000505804 RIC8BQ9NVN3 520 aa5.75□□□□□ -1.49
TOPBP1-204ENST00000505804 ACOT7O00154 380 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 CLASP2O75122 1294 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 F2P00734 622 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 LRG1P02750 347 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 VIL1P09327 827 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 PFKLP17858 780 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 PTPN1P18031 435 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 SCNN1BP51168 640 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 CACNB2Q08289 660 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 SEC23AQ15436 765 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 CR1LQ2VPA4 569 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 PAN2Q504Q3 1202 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 DDX46Q7L014 1031 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 OTOP1Q7RTM1 612 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 STRA8Q7Z7C7 330 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 KIF18BQ86Y91 864 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 NOSTRINQ8IVI9 506 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 ZKSCAN5Q9Y2L8 839 aa5.74□□□□□ -1.49
TOPBP1-204ENST00000505804 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 C8BP07358 591 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 ATP2A2P16615 1042 aaKnown RBP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 FAHP16930 419 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 CNGA1P29973 690 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 SOX5P35711 763 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 IRF9Q00978 393 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 CT47A1Q5JQC4 288 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 TEPPQ6URK8 271 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 STK32CQ86UX6 486 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 TTLL11Q8NHH1 800 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 CPA5Q8WXQ8 436 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 DDX11Q96FC9 970 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 BOCQ9BWV1 1114 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 FAM126AQ9BYI3 521 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 PDGFDQ9GZP0 370 aaPredicted RBP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 RNF38Q9H0F5 515 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 RBPJLQ9UBG7 517 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 FAN1Q9Y2M0 1017 aa5.73□□□□□ -1.49
TOPBP1-204ENST00000505804 DVL2O14641 736 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 GAS7O60861 476 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 C4BPAP04003 597 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 KRT1P04264 644 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 YBX3P16989 372 aaKnown RBP eCLIP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 GLDCP23378 1020 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 IGFBP6P24592 240 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 GJA4P35212 333 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 LIMS1P48059 325 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 NKX3-2P78367 333 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 FOXO4P98177 505 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 DSG1Q02413 1049 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 STRN3Q13033 797 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 TMEM132BQ14DG7 1078 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 SART3Q15020 963 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 ATG14Q6ZNE5 492 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 OR2W6PQ8NHA6 318 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 SMARCC2Q8TAQ2 1214 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 CHTF18Q8WVB6 975 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 DLG3Q92796 817 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 THG1LQ9NWX6 298 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 H2AFY2Q9P0M6 372 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 WASF3Q9UPY6 502 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 B3GALT1Q9Y5Z6 326 aa5.72□□□□□ -1.49
TOPBP1-204ENST00000505804 HIP1RO75146 1068 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 C1QTNF9P0C862 333 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 SLC9A1P19634 815 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 NFKB2Q00653 900 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 B3GNT8Q7Z7M8 397 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 ZC3H18Q86VM9 953 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 TMEFF1Q8IYR6 380 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 GPR101Q96P66 508 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 FMNL2Q96PY5 1086 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 SLC38A3Q99624 504 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 NGRNQ9NPE2 291 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 KCNH7Q9NS40 1196 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 OXSMQ9NWU1 459 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 SMG5Q9UPR3 1016 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 IRAK3Q9Y616 596 aa5.71□□□□□ -1.5
TOPBP1-204ENST00000505804 PRAMEF25A6NGN4 478 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 H7C1D1 291 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 NFIBO00712 420 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 MED14OSP0DP75 135 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 CYP2C8P10632 490 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 POU3F3P20264 500 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 ID4P47928 161 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 KIF11P52732 1056 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 IL2P60568 153 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 SSPNQ14714 243 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 DHCR24Q15392 516 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 ZNF174Q15697 407 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 CREB3L3Q68CJ9 461 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 TMC5Q6UXY8 1006 aa5.7□□□□□ -1.5
TOPBP1-204ENST00000505804 PROSER1Q86XN7 944 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms