RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 FAM20AQ96MK3 541 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CEP89Q96ST8 783 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 RIT2Q99578 217 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 GPR20Q99678 358 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 HSD17B14Q9BPX1 270 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 BRMS1Q9HCU9 246 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 FBXO2Q9UK22 296 aaPredicted RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 RCOR1Q9UKL0 485 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 NKRFO15226 690 aaKnown RBP eCLIP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 MAP3K13O43283 966 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ZNF862O60290 1169 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 NEMFO60524 1076 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SGPL1O95470 568 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 GGPS1O95749 300 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 PGK1P00558 417 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 F2P00734 622 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 SPATA31C1P0DKV0 1188 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 TXNP10599 105 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 MCM7P33993 719 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 GJA8P48165 433 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ADAM17P78536 824 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 HIC1Q14526 733 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 TTLL4Q14679 1199 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ECM1Q16610 540 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ANO1Q5XXA6 986 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ARL6IP4Q66PJ3 421 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 MCTP1Q6DN14 999 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 KCNV1Q6PIU1 500 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 USP49Q70CQ1 688 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CYFIP1Q7L576 1253 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 TLK2Q86UE8 772 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 U2AF1L4Q8WU68 220 aaKnown RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 UIMC1Q96RL1 719 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 UNC45AQ9H3U1 944 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 HMX1Q9NP08 348 aaPredicted RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 ZHX1Q9UKY1 873 aaPredicted RBP5.6□□□□□ -1.51
LMNB1-208ENST00000504788 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 CDH23Q9H251 3354 aa5.6□□□□□ -1.51
LMNB1-208ENST00000504788 EMSYQ7Z589 1322 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 IGSF9BQ9UPX0 1349 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 EVPLQ92817 2033 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 ZBTB42B2RXF5 422 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 SLITRK3O94933 977 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 YEATS4O95619 227 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 HSP90AA1P07900 732 aaKnown RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 MMP3P08254 477 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 NUCB2P80303 420 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 PURAQ00577 322 aaKnown RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 NEDD9Q14511 834 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 LRRC41Q15345 812 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 UGCGQ16739 394 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 GNPTABQ3T906 1256 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 FOXD4L5Q5VV16 416 aaPredicted RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 NLRX1Q86UT6 975 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 CCDC60Q8IWA6 550 aaPredicted RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 SLC43A3Q8NBI5 491 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 PPTC7Q8NI37 304 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 AFAP1L1Q8TED9 768 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 AFG1LQ8WV93 481 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 FOXD4L4Q8WXT5 416 aaPredicted RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 TNPO1Q92973 898 aaKnown RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 CDHR1Q96JP9 859 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 ZNF577Q9BSK1 485 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 TTC12Q9H892 705 aaPredicted RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 EHMT1Q9H9B1 1298 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 TBC1D22BQ9NU19 505 aa5.59□□□□□ -1.51
LMNB1-208ENST00000504788 TFIP11Q9UBB9 837 aaKnown RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 MAFBQ9Y5Q3 323 aaPredicted RBP5.59□□□□□ -1.51
LMNB1-208ENST00000504788 A0A087X0B3 334 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 FAM237AA0A1B0GTK4 181 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PP2D1A8MPX8 630 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 B4DLN1 442 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 RBAK-RBAKDNI3L0D1 243 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LAD1O00515 517 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 DYNC1LI2O43237 492 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 MSCO60682 206 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PPP6R2O75170 966 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PPFIA4O75335 1185 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 GH1P01241 217 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 OR52Z1P0C646 297 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CDC25AP30304 524 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ACTR2P61160 394 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 BEX3Q00994 111 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LAMC2Q13753 1193 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 PDIA5Q14554 519 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SNX17Q15036 470 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 CALCRLQ16602 461 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 NAALADL2Q58DX5 795 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LRCH2Q5VUJ6 765 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ATL3Q6DD88 541 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 ZNF746Q6NUN9 644 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 SHC4Q6S5L8 630 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TRIM50Q86XT4 487 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 TMEM87AQ8NBN3 555 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 LEO1Q8WVC0 666 aaPredicted RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 KAT6AQ92794 2004 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 DEFB118Q96PH6 123 aa5.58□□□□□ -1.52
LMNB1-208ENST00000504788 MPHOSPH6Q99547 160 aaKnown RBP5.58□□□□□ -1.52
LMNB1-208ENST00000504788 NAP1L4Q99733 375 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms