RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TAF4BQ92750 862 aa26.91■■□□□ 1.9
DDX41-202ENST00000503078 HAS1Q92839 578 aa26.91■■□□□ 1.9
DDX41-202ENST00000503078 ATAD5Q96QE3 1844 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 HMGB1P1B2RPK0 211 aaPredicted RBP26.9■■□□□ 1.9
DDX41-202ENST00000503078 HSPA9P38646 679 aaKnown RBP26.9■■□□□ 1.9
DDX41-202ENST00000503078 TRADDQ15628 312 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 CCDC65Q8IXS2 484 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 GANQ9H2C0 597 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 PCDHA2Q9Y5H9 948 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 BTNL10A8MVZ5 291 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 SSBP05455 408 aaKnown RBP eCLIP26.9■■□□□ 1.9
DDX41-202ENST00000503078 NT5C3AQ9H0P0 336 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 KANSL2Q9H9L4 492 aa26.9■■□□□ 1.9
DDX41-202ENST00000503078 PPP1R37O75864 691 aa26.89■■□□□ 1.9
DDX41-202ENST00000503078 KIAA0754O94854 1291 aa26.89■■□□□ 1.9
DDX41-202ENST00000503078 ENOX2Q16206 610 aaKnown RBP26.89■■□□□ 1.9
DDX41-202ENST00000503078 HYIQ5T013 277 aa26.89■■□□□ 1.9
DDX41-202ENST00000503078 EIF1ADQ8N9N8 165 aaKnown RBP26.89■■□□□ 1.9
DDX41-202ENST00000503078 PAGR1Q9BTK6 254 aa26.89■■□□□ 1.9
DDX41-202ENST00000503078 TAF1DQ9H5J8 278 aaPredicted RBP26.89■■□□□ 1.9
DDX41-202ENST00000503078 KDM3AQ9Y4C1 1321 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 PLCG2P16885 1265 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 RPS6KA1Q15418 735 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 PPP1R18Q6NYC8 613 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 KLHL7Q8IXQ5 586 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 ISCUQ9H1K1 167 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 KCTD10Q9H3F6 313 aa26.89■■□□□ 1.89
DDX41-202ENST00000503078 NHSQ6T4R5 1651 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 MEFVO15553 781 aaPredicted RBP26.88■■□□□ 1.89
DDX41-202ENST00000503078 MARCH6O60337 910 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 EPS15P42566 896 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 PTGISQ16647 500 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 UBE2SQ16763 222 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 C10orf76Q5T2E6 689 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 NAA35Q5VZE5 725 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 POLD4Q9HCU8 107 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 PCDHA12Q9UN75 941 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 PLAAQ9Y263 795 aa26.88■■□□□ 1.89
DDX41-202ENST00000503078 MAATS1Q7Z4T9 603 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 ZC3H3Q8IXZ2 948 aaKnown RBP26.87■■□□□ 1.89
DDX41-202ENST00000503078 OTUD6BQ8N6M0 293 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 GJA10Q969M2 543 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 KCNK3O14649 394 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 MDH1P40925 334 aaKnown RBP26.87■■□□□ 1.89
DDX41-202ENST00000503078 CLK2P49760 499 aaKnown RBP26.87■■□□□ 1.89
DDX41-202ENST00000503078 NFIXQ14938 502 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 FBXW10Q5XX13 1052 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 MICALCLQ6ZW33 695 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 SCFD1Q8WVM8 642 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 GPR101Q96P66 508 aaPredicted RBP26.87■■□□□ 1.89
DDX41-202ENST00000503078 MTMR4Q9NYA4 1195 aa26.87■■□□□ 1.89
DDX41-202ENST00000503078 E9PMD0 336 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 ITGB3BPQ13352 177 aaPredicted RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 ADAM9Q13443 819 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 GRAPQ13588 217 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 HERC4Q5GLZ8 1057 aaPredicted RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 CEP85LQ5SZL2 805 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 RC3H1Q5TC82 1133 aaKnown RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 MCTP2Q6DN12 878 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 GRAPLQ8TC17 118 aaPredicted RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 PBKQ96KB5 322 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 PLCB1Q9NQ66 1216 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 EMILIN3Q9NT22 766 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 KIF4AO95239 1232 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 SNHG28P0DPA3 235 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 HNRNPH1P31943 449 aaKnown RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 RHBDL3P58872 404 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 KCNH2Q12809 1159 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 LRIG3Q6UXM1 1119 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 CNPY4Q8N129 248 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 LRRC47Q8N1G4 583 aaKnown RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 ZNF473Q8WTR7 871 aaKnown RBP26.86■■□□□ 1.89
DDX41-202ENST00000503078 TMBIM4Q9HC24 238 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 GPCPD1Q9NPB8 672 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 PLIN4Q96Q06 1357 aa26.86■■□□□ 1.89
DDX41-202ENST00000503078 PNMA6FA0A0J9YX94 578 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 RPS6KA4O75676 772 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 PLA2G4BP0C869 781 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 USP11P51784 963 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 ERVK-9P63128 1117 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 C15orf52Q6ZUT6 534 aaKnown RBP26.85■■□□□ 1.89
DDX41-202ENST00000503078 KIAA1024Q9UPX6 916 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 TNRC6CQ9HCJ0 1690 aaKnown RBP26.85■■□□□ 1.89
DDX41-202ENST00000503078 GCFC2P16383 781 aaKnown RBP26.85■■□□□ 1.89
DDX41-202ENST00000503078 PTK2Q05397 1052 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 CUL1Q13616 776 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 HLTFQ14527 1009 aaKnown RBP eCLIP26.85■■□□□ 1.89
DDX41-202ENST00000503078 EDRF1Q3B7T1 1238 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 PPP4R3CPQ6ZMV5 832 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 YTHDF3Q7Z739 585 aaKnown RBP26.85■■□□□ 1.89
DDX41-202ENST00000503078 SCFD2Q8WU76 684 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 YY1AP1Q9H869 796 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 CAPN7Q9Y6W3 813 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 BTAF1O14981 1849 aa26.85■■□□□ 1.89
DDX41-202ENST00000503078 GOLGA6L10A6NI86 522 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 SRRM3A6NNA2 597 aaPredicted RBP26.84■■□□□ 1.89
DDX41-202ENST00000503078 IFI16Q16666 785 aaKnown RBP26.84■■□□□ 1.89
DDX41-202ENST00000503078 IRF2BP2Q7Z5L9 587 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 GPBP1Q86WP2 473 aa26.84■■□□□ 1.89
DDX41-202ENST00000503078 PRPF38AQ8NAV1 312 aaKnown RBP26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms