RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 EAF2Q96CJ1 260 aaPredicted RBP6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ATG4CQ96DT6 458 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ABHD17AQ96GS6 310 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 NDFIP2Q9NV92 336 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 DBNLQ9UJU6 430 aaKnown RBP6.68□□□□□ -1.34
SPTA1-209ENST00000498708 PARP14Q460N5 1801 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 FOCADQ5VW36 1801 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ASTN1O14525 1302 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 USP24Q9UPU5 2620 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 ANKRD11Q6UB99 2663 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 SETXQ7Z333 2677 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 A0A1W2PRG0 241 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 SHISA8B8ZZ34 492 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 CDK2AP1O14519 115 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 LZTS3O60299 673 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 POLR3DP05423 398 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 PFKMP08237 780 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 ACTN1P12814 892 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 GUCY1A2P33402 732 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 NBL1P41271 181 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 DLX2Q07687 328 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 ACVR2BQ13705 512 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 SMAD2Q15796 467 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 ABCB5Q2M3G0 1257 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 CCDC144BQ3MJ40 725 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 CERKLQ49MI3 558 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TCEAL5Q5H9L2 206 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TATDN1Q6P1N9 297 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 FRMD5Q7Z6J6 570 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 SSH3Q8TE77 659 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 PABPC5Q96DU9 382 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 ASIC4Q96FT7 647 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TGS1Q96RS0 853 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 SPC25Q9HBM1 224 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 IL1RAPL2Q9NP60 686 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 CABP5Q9NP86 173 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 GPR108Q9NPR9 543 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TRMT13Q9NUP7 481 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 FAM50BQ9Y247 325 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 EXOC6BQ9Y2D4 811 aa6.67□□□□□ -1.34
SPTA1-209ENST00000498708 DIS3Q9Y2L1 958 aaKnown RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 TRIP12Q14669 1992 aaPredicted RBP6.67□□□□□ -1.34
SPTA1-209ENST00000498708 MYH1P12882 1939 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 ATG2AQ2TAZ0 1938 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 SPTBN2O15020 2390 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 LINC01553A4QN01 128 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 MBTPS2O43462 519 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 PDGFBP01127 241 aaPredicted RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 ARAFP10398 606 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 CYP2D6P10635 497 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 ATP4AP20648 1035 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 AMPD1P23109 780 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 PLCD1P51178 756 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 SNRPNP63162 240 aaKnown RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 NKX3-2P78367 333 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 DEFB103AP81534 67 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 COL19A1Q14993 1142 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 SEPT2Q15019 361 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 ARSJQ5FYB0 599 aaPredicted RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 TTC6Q86TZ1 520 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 AACSQ86V21 672 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 CLEC10AQ8IUN9 316 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 MB21D1Q8N884 522 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 DNAJC2Q99543 621 aaKnown RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 SPOCK3Q9BQ16 436 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 C17orf80Q9BSJ5 609 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 FTOQ9C0B1 505 aaKnown RBP eCLIP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 ZCCHC2Q9C0B9 1178 aaKnown RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 CLDND1Q9NY35 253 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 SERPINB13Q9UIV8 391 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 MYO5AQ9Y4I1 1855 aaKnown RBP6.66□□□□□ -1.34
SPTA1-209ENST00000498708 CEP250Q9BV73 2442 aa6.66□□□□□ -1.34
SPTA1-209ENST00000498708 FASNP49327 2511 aaKnown RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 A6NJY4 79 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 STXBP3O00186 592 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 BACH1O14867 736 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 ATXN7O15265 892 aaPredicted RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 FLOT1O75955 427 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 SLC25A27O95847 323 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 IQCF3P0C7M6 154 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 RLBP1P12271 317 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 SHMT1P34896 483 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 WDR5P61964 334 aaKnown RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 CTBSQ01459 385 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 ST3GAL2Q16842 350 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 TCTN1Q2MV58 587 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 EML3Q32P44 896 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 TMEM63BQ5T3F8 832 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 MAMDC4Q6UXC1 1216 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 RPAINQ86UA6 219 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 RIOX2Q8IUF8 465 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 PPP1R13LQ8WUF5 828 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 SDR42E1Q8WUS8 393 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 UBE2Q2Q8WVN8 375 aa6.65□□□□□ -1.34
SPTA1-209ENST00000498708 NKD2Q969F2 451 aaPredicted RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 MRPL38Q96DV4 380 aaKnown RBP6.65□□□□□ -1.34
SPTA1-209ENST00000498708 DYNLL2Q96FJ2 89 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms