RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 CDK7P50613 346 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 TLE2Q04725 743 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 NEDD9Q14511 834 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 HSDL1Q3SXM5 330 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 CEP55Q53EZ4 464 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 METTL7BQ6UX53 244 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 CCDC83Q8IWF9 413 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 BLIDQ8IZY5 108 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 SLC43A3Q8NBI5 491 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 GIMAP8Q8ND71 665 aaPredicted RBP12.82□□□□□ -0.36
ERCC8-208ENST00000497892 SENP7Q9BQF6 1050 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 MXRA8Q9BRK3 442 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 LLPHQ9BRT6 129 aaKnown RBP12.82□□□□□ -0.36
ERCC8-208ENST00000497892 MTG1Q9BT17 334 aaPredicted RBP12.82□□□□□ -0.36
ERCC8-208ENST00000497892 ALG1Q9BT22 464 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 PHF20Q9BVI0 1012 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 GRIN2DO15399 1336 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 MROH7Q68CQ1 1323 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 PPP1R3GB7ZBB8 358 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 ARVCFO00192 962 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 MAFGO15525 162 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
ERCC8-208ENST00000497892 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
ERCC8-208ENST00000497892 CYP3A4P08684 503 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 KCNA2P16389 499 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 PSMC6P62333 389 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 ITGA7Q13683 1181 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 DGKDQ16760 1214 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 NIPA1Q7RTP0 329 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 SPRYD3Q8NCJ5 442 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 CYP2W1Q8TAV3 490 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 VTI1AQ96AJ9 217 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 SPATA33Q96N06 139 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 TOX2Q96NM4 488 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 SEZ6LQ9BYH1 1024 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 BCAS3Q9H6U6 928 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 MLXIPQ9HAP2 919 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 PDLIM7Q9NR12 457 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 KCNH7Q9NS40 1196 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 GJB4Q9NTQ9 266 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 KCNJ14Q9UNX9 436 aa12.81□□□□□ -0.36
ERCC8-208ENST00000497892 FAM86B1E9PN63 330 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 MEIS1O00470 390 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 SORBS3O60504 671 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 ATP9AO75110 1047 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 PPFIA4O75335 1185 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 F2P00734 622 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 FAM86B2P0C5J1 330 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 CYFIP1Q7L576 1253 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 FAM126BQ8IXS8 530 aa12.8□□□□□ -0.36
ERCC8-208ENST00000497892 ZMYND8Q9ULU4 1186 aaPredicted RBP12.8□□□□□ -0.36
ERCC8-208ENST00000497892 DCDC2CA8MYV0 355 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
ERCC8-208ENST00000497892 CLTBP09497 229 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 ZNF286BP0CG31 522 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 SYN1P17600 705 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 CIITAP33076 1130 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 ZNF76P36508 570 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 MCM2P49736 904 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 SETQ01105 290 aaPredicted RBP12.79□□□□□ -0.36
ERCC8-208ENST00000497892 FAAP100Q0VG06 881 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 KAT2BQ92831 832 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 GPR20Q99678 358 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 AGO4Q9HCK5 861 aaKnown RBP12.79□□□□□ -0.36
ERCC8-208ENST00000497892 PKD2L1Q9P0L9 805 aa12.79□□□□□ -0.36
ERCC8-208ENST00000497892 HAS3O00219 553 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 KIAA0355O15063 1070 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 EDIL3O43854 480 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 CD4P01730 458 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 ARP10275 920 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 USP11P51784 963 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 HMGN5P82970 282 aaKnown RBP12.78□□□□□ -0.36
ERCC8-208ENST00000497892 NBPF20Q3BBV1 942 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 NFRKBQ6P4R8 1299 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 LENG9Q96B70 501 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 C16orf70Q9BSU1 422 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 KATNAL1Q9BW62 490 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 JPH1Q9HDC5 661 aaPredicted RBP12.78□□□□□ -0.36
ERCC8-208ENST00000497892 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
ERCC8-208ENST00000497892 PRKAG2Q9UGJ0 569 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 TBX21Q9UL17 535 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 TELO2Q9Y4R8 837 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 NFASCO94856 1347 aa12.78□□□□□ -0.36
ERCC8-208ENST00000497892 TANC1Q9C0D5 1861 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 TLR3O15455 904 aaKnown RBP12.77□□□□□ -0.37
ERCC8-208ENST00000497892 B4GALT4O60513 344 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 MMP1P03956 469 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 LGALS2P05162 132 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 COL9A1P20849 921 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 KRT2P35908 639 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 SP4Q02446 784 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
ERCC8-208ENST00000497892 ITGB3BPQ13352 177 aaPredicted RBP12.77□□□□□ -0.37
ERCC8-208ENST00000497892 TRIM29Q14134 588 aa12.77□□□□□ -0.37
ERCC8-208ENST00000497892 NONOQ15233 471 aaKnown RBP eCLIP12.77□□□□□ -0.37
ERCC8-208ENST00000497892 PRR16Q569H4 304 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms