RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 NSUN3Q9H649 340 aaKnown RBP25.11■■□□□ 1.61
CLIC4-204ENST00000497755 ZNF215Q9UL58 517 aaPredicted RBP25.11■■□□□ 1.61
CLIC4-204ENST00000497755 ALADP13716 330 aa25.1■■□□□ 1.61
CLIC4-204ENST00000497755 PCNX4Q63HM2 1172 aa25.1■■□□□ 1.61
CLIC4-204ENST00000497755 USP17L6PQ6QN14 398 aa25.1■■□□□ 1.61
CLIC4-204ENST00000497755 IGDCC4Q8TDY8 1250 aa25.1■■□□□ 1.61
CLIC4-204ENST00000497755 NRCAMQ92823 1304 aa25.1■■□□□ 1.61
CLIC4-204ENST00000497755 E7EWF7 191 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 MEIS2O14770 477 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 LINC00271P0C7V0 271 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 GSPT1P15170 499 aaKnown RBP25.09■■□□□ 1.61
CLIC4-204ENST00000497755 SP4Q02446 784 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 CATIPQ7Z7H3 387 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 RPAINQ86UA6 219 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 EHMT1Q9H9B1 1298 aa25.09■■□□□ 1.61
CLIC4-204ENST00000497755 C5orf67F2Z3F1 127 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 PDE4AP27815 886 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 XRRA1Q6P2D8 792 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 RUFY4Q6ZNE9 571 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 EP400NLQ6ZTU2 488 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 RALYLQ86SE5 291 aaKnown RBP25.08■■□□□ 1.61
CLIC4-204ENST00000497755 FIBCD1Q8N539 461 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 NCOA7Q8NI08 942 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 SMARCC2Q8TAQ2 1214 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 RALGAPA2Q2PPJ7 1873 aa25.08■■□□□ 1.61
CLIC4-204ENST00000497755 POTEB3A0JP26 581 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 PIK3CDO00329 1044 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 ATP9AO75110 1047 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 GHRP10912 638 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 BMPR1AP36894 532 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 LTBRP36941 435 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 ANTXR2P58335 489 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 SART3Q15020 963 aaKnown RBP25.07■■□□□ 1.6
CLIC4-204ENST00000497755 TTC22Q5TAA0 569 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 POTEBQ6S5H4 581 aa25.07■■□□□ 1.6
CLIC4-204ENST00000497755 TRIOO75962 3097 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 ENPP3O14638 875 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 RB1P06400 928 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 CHMLP26374 656 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 CTNNB1P35222 781 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 ZP2Q05996 745 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 MGAT3Q09327 533 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 NLRX1Q86UT6 975 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 GIMAP8Q8ND71 665 aaPredicted RBP25.06■■□□□ 1.6
CLIC4-204ENST00000497755 SPZ1Q9BXG8 430 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 CLDND1Q9NY35 253 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 TTC3P53804 2025 aa25.06■■□□□ 1.6
CLIC4-204ENST00000497755 C19orf67A6NJJ6 358 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 GRM6O15303 877 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 NCK2O43639 380 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 TCF7P36402 384 aaPredicted RBP25.05■■□□□ 1.6
CLIC4-204ENST00000497755 LPIN1Q14693 890 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 CTC1Q2NKJ3 1217 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 TAF2Q6P1X5 1199 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 RUFY2Q8WXA3 655 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 CUL5Q93034 780 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 RRP36Q96EU6 259 aaKnown RBP25.05■■□□□ 1.6
CLIC4-204ENST00000497755 MAP3K14Q99558 947 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 RC3H2Q9HBD1 1191 aaKnown RBP25.05■■□□□ 1.6
CLIC4-204ENST00000497755 PRKAG3Q9UGI9 489 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 FAM50BQ9Y247 325 aa25.05■■□□□ 1.6
CLIC4-204ENST00000497755 ATG2AQ2TAZ0 1938 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 GSTTP1A0A1W2PQM5 241 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 DCXO43602 365 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 KCNA2P16389 499 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 SMARCA1P28370 1054 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 CLP1Q92989 425 aaKnown RBP25.04■■□□□ 1.6
CLIC4-204ENST00000497755 UIMC1Q96RL1 719 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 WDFY4Q6ZS81 3184 aa25.04■■□□□ 1.6
CLIC4-204ENST00000497755 PPFIA1Q13136 1202 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 MARCH8Q5T0T0 291 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 MB21D2Q8IYB1 491 aaPredicted RBP25.03■■□□□ 1.6
CLIC4-204ENST00000497755 SEPT1Q8WYJ6 367 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 ZNF689Q96CS4 500 aaPredicted RBP25.03■■□□□ 1.6
CLIC4-204ENST00000497755 GPRASP2Q96D09 838 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 C11orf84Q9BUA3 381 aaPredicted RBP25.03■■□□□ 1.6
CLIC4-204ENST00000497755 MYL10Q9BUA6 226 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 LMAN2LQ9H0V9 348 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 LY9Q9HBG7 655 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 ADGRA3Q8IWK6 1321 aa25.03■■□□□ 1.6
CLIC4-204ENST00000497755 MBLAC1A4D2B0 266 aaPredicted RBP25.02■■□□□ 1.6
CLIC4-204ENST00000497755 ITGB5P18084 799 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 MARK3P27448 753 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 DLX2Q07687 328 aaPredicted RBP25.02■■□□□ 1.6
CLIC4-204ENST00000497755 HYAL1Q12794 435 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 FBXO47Q5MNV8 452 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 ADHFE1Q8IWW8 467 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 ZNF654Q8IZM8 581 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 CTCFLQ8NI51 663 aaPredicted RBP25.02■■□□□ 1.6
CLIC4-204ENST00000497755 DNAJB3Q8WWF6 145 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 RWDD3Q9Y3V2 267 aa25.02■■□□□ 1.6
CLIC4-204ENST00000497755 GRIK4Q16099 956 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 CSPP1Q1MSJ5 1256 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 RSPH3Q86UC2 560 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 SRBD1Q8N5C6 995 aaKnown RBP25.01■■□□□ 1.59
CLIC4-204ENST00000497755 CDHR1Q96JP9 859 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 PSTPIP2Q9H939 334 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 ERAP1Q9NZ08 941 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 TUBE1Q9UJT0 475 aa25.01■■□□□ 1.59
CLIC4-204ENST00000497755 SGSM2O43147 1006 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms