RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 CYB5D2Q8WUJ1 264 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 BRF1Q92994 677 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ATG4CQ96DT6 458 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ZBTB10Q96DT7 871 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 UROC1Q96N76 676 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SLC6A18Q96N87 628 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SRPK1Q96SB4 655 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TCHPQ9BT92 498 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 LRRCC1Q9C099 1032 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ABCG4Q9H172 646 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TNKS2Q9H2K2 1166 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CARS2Q9HA77 564 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF304Q9HCX3 659 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SPATS2LQ9NUQ6 558 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TYW1Q9NV66 732 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 C19orf73Q9NVV2 129 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 FANCLQ9NW38 375 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 UBAP1Q9NZ09 502 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SLC5A6Q9Y289 635 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TACC3Q9Y6A5 838 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SNCAIPQ9Y6H5 919 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 V9GYY5 206 aaPredicted RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 PRDM2Q13029 1718 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 LINC00854A0A1B0GVQ3 168 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 DIAPH1O60610 1272 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SNUPNO95149 360 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CST3P01034 146 aaPredicted RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TSPY4P0CV99 314 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TSPY10P0CW01 314 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CYP11B2P19099 503 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 MSNP26038 577 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CASP2P42575 452 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CDR1P51861 262 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 PDE4BQ07343 736 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC173Q0VFZ6 552 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 IKZF1Q13422 519 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 POSTNQ15063 836 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 PPP2R5EQ16537 467 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 ZNF449Q6P9G9 518 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SEPT14Q6ZU15 432 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 DZIP1Q86YF9 867 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 MCF2L2Q86YR7 1114 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 DTWD2Q8NBA8 298 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 GSDMBQ8TAX9 411 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 DNAAF4Q8WXU2 420 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 RTF1Q92541 710 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 RPGRQ92834 1020 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 DHTKD1Q96HY7 919 aaPredicted RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.52□□□□□ -1.851e-12■□□□□ 11.1
SNRNP48-202ENST00000496946 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 GTF3C4Q9UKN8 822 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 AKNAQ7Z591 1439 aa3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 SETD1BQ9UPS6 1966 aaKnown RBP3.52□□□□□ -1.85
SNRNP48-202ENST00000496946 TSPAN6O43657 245 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ORC4O43929 436 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CDC45O75419 566 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TPM1P09493 284 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TRIM21P19474 475 aaKnown RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 HK2P52789 917 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CSE1LP55060 971 aaKnown RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 UBXN2AP68543 259 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ZBTB17Q13105 803 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 KIAA0753Q2KHM9 967 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 PLEKHG4Q58EX7 1191 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SFRP5Q5T4F7 317 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 FAM114A1Q8IWE2 563 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CCDC144CPQ8IYA2 1237 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 DCLK2Q8N568 766 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 LRRN4CLQ8ND94 238 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 MIPOL1Q8TD10 442 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 E2F7Q96AV8 911 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ANAPC16Q96DE5 110 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 FAXDC2Q96IV6 333 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 GPR101Q96P66 508 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 FERD3LQ96RJ6 166 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CENPOQ9BU64 300 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CAPS2Q9BXY5 557 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 VPS33BQ9H267 617 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TAOK3Q9H2K8 898 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 EPB41L4AQ9HCS5 686 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 MBNL3Q9NUK0 354 aaKnown RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SEPT10Q9P0V9 454 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 DAAM1Q9Y4D1 1078 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CAPN6Q9Y6Q1 641 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SYNGAP1Q96PV0 1343 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 GNAT3A8MTJ3 354 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SMTNL1A8MU46 457 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SHOXO15266 292 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 SPTLC2O15270 562 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 B3GALNT1O75752 331 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 FGFR1OPO95684 399 aaKnown RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 IDEP14735 1019 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 TAL1P17542 331 aaPredicted RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 MATR3P43243 847 aaKnown RBP eCLIP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 PAPOLAP51003 745 aaKnown RBP3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 UBASH3AP57075 661 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 GPSM2P81274 684 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 CYP27A1Q02318 531 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 ARHGEF6Q15052 776 aa3.51□□□□□ -1.85
SNRNP48-202ENST00000496946 RABEP1Q15276 862 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms