RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 SESTD1Q86VW0 696 aa18.9■□□□□ 0.62
CNOT3-207ENST00000496327 TRIM50Q86XT4 487 aa18.9■□□□□ 0.62
CNOT3-207ENST00000496327 INTS4Q96HW7 963 aaKnown RBP18.9■□□□□ 0.62
CNOT3-207ENST00000496327 RIT2Q99578 217 aa18.9■□□□□ 0.62
CNOT3-207ENST00000496327 TUT1Q9H6E5 874 aaKnown RBP18.9■□□□□ 0.62
CNOT3-207ENST00000496327 PRDM5Q9NQX1 630 aaPredicted RBP18.9■□□□□ 0.62
CNOT3-207ENST00000496327 H3BQV1 296 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 B4GALT4O60513 344 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 GAS7O60861 476 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 LGR5O75473 907 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 CCNE2O96020 404 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 CD4P01730 458 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 SYN1P17600 705 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 LRCH2Q5VUJ6 765 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 ZNF746Q6NUN9 644 aaPredicted RBP18.89■□□□□ 0.61
CNOT3-207ENST00000496327 NOSTRINQ8IVI9 506 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 C7orf31Q8N865 590 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 ETNPPLQ8TBG4 499 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 PPP1R13LQ8WUF5 828 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 TEKT3Q9BXF9 490 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 TMEM39AQ9NV64 488 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 EMSYQ7Z589 1322 aa18.89■□□□□ 0.61
CNOT3-207ENST00000496327 KIAA0355O15063 1070 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 ATG7O95352 703 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 SUPT20HL2P0C7V6 817 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 LARP1BQ659C4 914 aaKnown RBP18.88■□□□□ 0.61
CNOT3-207ENST00000496327 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 SMAP1Q8IYB5 467 aaPredicted RBP18.88■□□□□ 0.61
CNOT3-207ENST00000496327 GLG1Q92896 1179 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 FAM20AQ96MK3 541 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 TRPV6Q9H1D0 765 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 SMARCAD1Q9H4L7 1026 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 AZI2Q9H6S1 392 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 KCNMB3Q9NPA1 279 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 TRMT13Q9NUP7 481 aaKnown RBP18.88■□□□□ 0.61
CNOT3-207ENST00000496327 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 TBX21Q9UL17 535 aa18.88■□□□□ 0.61
CNOT3-207ENST00000496327 KIF28PB7ZC32 967 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 TBX3O15119 743 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 U2AF2P26368 475 aaKnown RBP eCLIP18.87■□□□□ 0.61
CNOT3-207ENST00000496327 PDE4DIPQ5VU43 2346 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 ABHD15Q6UXT9 468 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 SH3RF1Q7Z6J0 888 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 PCYT2Q99447 389 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 ERAP1Q9NZ08 941 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 GTF2IRD1Q9UHL9 959 aa18.87■□□□□ 0.61
CNOT3-207ENST00000496327 NOL7Q9UMY1 257 aaKnown RBP18.87■□□□□ 0.61
CNOT3-207ENST00000496327 SCN10AQ9Y5Y9 1956 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 MYH7BA7E2Y1 1941 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 TRIM43BA6NCK2 446 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 WDR64B1ANS9 1081 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 BACH1O14867 736 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 MARCH6O60337 910 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 PSMD10O75832 226 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 ATP2B1P20020 1258 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 PDCP20941 246 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 TRAPPC10P48553 1259 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 GDF6Q6KF10 455 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-207ENST00000496327 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 GJA10Q969M2 543 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 TRIM43Q96BQ3 446 aaPredicted RBP18.86■□□□□ 0.61
CNOT3-207ENST00000496327 UNC45AQ9H3U1 944 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 NOD1Q9Y239 953 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 ALPK3Q96L96 1907 aa18.86■□□□□ 0.61
CNOT3-207ENST00000496327 IGKV6D-21A0A0A0MT36 114 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 WNT7AO00755 349 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 NEMFO60524 1076 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 PSAPP07602 524 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 SMIM10L2AP0DMW4 78 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 SMIM10L2BP0DMW5 78 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 MARK3P27448 753 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 SFNP31947 248 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 STAT5BP51692 787 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 ORC2Q13416 577 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-207ENST00000496327 PTGISQ16647 500 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 PLPPR4Q7Z2D5 763 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 RDM1Q8NG50 284 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 LBHD1Q9BQE6 289 aaPredicted RBP18.85■□□□□ 0.61
CNOT3-207ENST00000496327 FOXD4L1Q9NU39 408 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 SAMM50Q9Y512 469 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 PCDHA10Q9Y5I2 948 aa18.85■□□□□ 0.61
CNOT3-207ENST00000496327 C17orf102A2RUQ5 167 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 TNRC18O15417 2968 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-207ENST00000496327 CHMP2AO43633 222 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 BAG4O95429 457 aaKnown RBP18.84■□□□□ 0.61
CNOT3-207ENST00000496327 RAG1P15918 1043 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 SLC26A2P50443 739 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 JAK3P52333 1124 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 CALCRLQ16602 461 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 TTC38Q5R3I4 469 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 CCDC60Q8IWA6 550 aaPredicted RBP18.84■□□□□ 0.61
CNOT3-207ENST00000496327 SLFN12Q8IYM2 578 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 AFAP1L1Q8TED9 768 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 HAS1Q92839 578 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 DISC1Q9NRI5 854 aa18.84■□□□□ 0.61
CNOT3-207ENST00000496327 HSP90AA1P07900 732 aaKnown RBP18.83■□□□□ 0.6
CNOT3-207ENST00000496327 GNAT1P11488 350 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms