RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 SPPL3Q8TCT6 385 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 ASIC4Q96FT7 647 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 C11orf84Q9BUA3 381 aaPredicted RBP8.3□□□□□ -1.08
UBP1-213ENST00000496310 TUT1Q9H6E5 874 aaKnown RBP8.3□□□□□ -1.08
UBP1-213ENST00000496310 DCTPP1Q9H773 170 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 MLXIPQ9HAP2 919 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 TCP11L1Q9NUJ3 509 aa8.3□□□□□ -1.08
UBP1-213ENST00000496310 MRPL42Q9Y6G3 142 aaKnown RBP8.3□□□□□ -1.08
UBP1-213ENST00000496310 NEDD4P46934 1319 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 ADGRA3Q8IWK6 1321 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 WDR81Q562E7 1941 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 A0A0D9SFI3 127 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 NCK2O43639 380 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 PPP1R11O60927 126 aaPredicted RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 KDM4AO75164 1064 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 EYA4O95677 639 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 MMP1P03956 469 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 RB1P06400 928 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 HSPD1P10809 573 aaKnown RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 MS4A1P11836 297 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 HOXD8P13378 290 aaPredicted RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 SIGLEC14Q08ET2 396 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 PGM5Q15124 567 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 ZNF589Q86UQ0 364 aaPredicted RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 STAG2Q8N3U4 1231 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 KLHL23Q8NBE8 558 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 VN1R2Q8NFZ6 395 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 POF1BQ8WVV4 589 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 LINC01599Q8WXQ3 324 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 PDCD2LQ9BRP1 358 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 LMAN2LQ9H0V9 348 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 JMJD4Q9H9V9 463 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 RC3H2Q9HBD1 1191 aaKnown RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 RTEL1Q9NZ71 1219 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 HCSTQ9UBK5 93 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 MYH9P35579 1960 aaKnown RBP8.29□□□□□ -1.08
UBP1-213ENST00000496310 DCHS1Q96JQ0 3298 aa8.29□□□□□ -1.08
UBP1-213ENST00000496310 DMDP11532 3685 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 MARK3P27448 753 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 HOXC8P31273 242 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 TMEM62Q0P6H9 643 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 LPIN1Q14693 890 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 ALX1Q15699 326 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 MFSD6Q6ZSS7 791 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 CYFIP1Q7L576 1253 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 RTN4RL1Q86UN2 441 aaPredicted RBP8.28□□□□□ -1.08
UBP1-213ENST00000496310 VSIG10LQ86VR7 867 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 MCF2L2Q86YR7 1114 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 EFHBQ8N7U6 833 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 SMRP1Q8NCR6 262 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 PNMA1Q8ND90 353 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 MICAL1Q8TDZ2 1067 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 LMBR1Q8WVP7 490 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 DNAJB3Q8WWF6 145 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 CLP1Q92989 425 aaKnown RBP8.28□□□□□ -1.08
UBP1-213ENST00000496310 ZNF689Q96CS4 500 aaPredicted RBP8.28□□□□□ -1.08
UBP1-213ENST00000496310 AGO3Q9H9G7 860 aaKnown RBP8.28□□□□□ -1.08
UBP1-213ENST00000496310 TRPC6Q9Y210 931 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 MRPL11Q9Y3B7 192 aaKnown RBP8.28□□□□□ -1.08
UBP1-213ENST00000496310 VPS13AQ96RL7 3174 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 C2orf16Q68DN1 1984 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 CACNA1AO00555 2505 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 TTC41PQ6P2S7 1318 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 CACNA1BQ00975 2339 aa8.28□□□□□ -1.08
UBP1-213ENST00000496310 TRIM6-TRIM34B2RNG4 842 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 B4E1Z4 1266 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 NOP56O00567 594 aaKnown RBP8.27□□□□□ -1.09
UBP1-213ENST00000496310 DGKIO75912 1065 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 CD52P31358 61 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 HSD17B4P51659 736 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 IGBP1P78318 339 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 COASYQ13057 564 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 SEMA3FQ13275 785 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 NMIQ13287 307 aaPredicted RBP8.27□□□□□ -1.09
UBP1-213ENST00000496310 CBX2Q14781 532 aaPredicted RBP8.27□□□□□ -1.09
UBP1-213ENST00000496310 FAM26DQ5JW98 314 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 GPATCH4Q5T3I0 446 aaKnown RBP8.27□□□□□ -1.09
UBP1-213ENST00000496310 LLGL2Q6P1M3 1020 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 TMEM105Q8N8V8 129 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 PIBF1Q8WXW3 757 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 APBB2Q92870 758 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 TTC14Q96N46 770 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 PHF7Q9BWX1 381 aaPredicted RBP8.27□□□□□ -1.09
UBP1-213ENST00000496310 TLE6Q9H808 572 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 EHMT1Q9H9B1 1298 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 TSHZ2Q9NRE2 1034 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 PNMA2Q9UL42 364 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 CDY2AQ9Y6F7 541 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 DOCK6Q96HP0 2047 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 CCDC171Q6TFL3 1326 aa8.27□□□□□ -1.09
UBP1-213ENST00000496310 PRR23AA6NEV1 266 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 PARP1P09874 1014 aaKnown RBP8.26□□□□□ -1.09
UBP1-213ENST00000496310 WEE2P0C1S8 567 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 MX1P20591 662 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 CCND2P30279 289 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 ERVFC1P60507 584 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 ADAM17P78536 824 aa8.26□□□□□ -1.09
UBP1-213ENST00000496310 MRPS9P82933 396 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms