RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MICU3Q86XE3 530 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 LZTS2Q9BRK4 669 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 ESYT1Q9BSJ8 1104 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 ZNF215Q9UL58 517 aaPredicted RBP12.52□□□□□ -0.41
RNF220-217ENST00000496262 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
RNF220-217ENST00000496262 UPP2O95045 317 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 BMP1P13497 986 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
RNF220-217ENST00000496262 MARK3P27448 753 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 GNAQP50148 359 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 LMBR1Q8WVP7 490 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 SEPT8Q92599 483 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 TMEM87BQ96K49 555 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 TGS1Q96RS0 853 aaKnown RBP12.51□□□□□ -0.41
RNF220-217ENST00000496262 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 C17orf80Q9BSJ5 609 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 OSBPL7Q9BZF2 842 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 SUGCTQ9HAC7 445 aa12.51□□□□□ -0.41
RNF220-217ENST00000496262 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 ATP9AO75110 1047 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 CALM1P0DP23 149 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 CALM2P0DP24 149 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 CALM3P0DP25 149 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 GNAT1P11488 350 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
RNF220-217ENST00000496262 HOXC8P31273 242 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 TCF7P36402 384 aaPredicted RBP12.5□□□□□ -0.41
RNF220-217ENST00000496262 PLEKHG4Q58EX7 1191 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 HLA-CQ95604 372 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
RNF220-217ENST00000496262 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
RNF220-217ENST00000496262 DOCK5Q9H7D0 1870 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 ITGB5P18084 799 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 LIFRP42702 1097 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 ERVK-21P61565 698 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 PPFIA1Q13136 1202 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 MTMR1Q13613 665 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 RUFY4Q6ZNE9 571 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 TMTC3Q6ZXV5 915 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 TMTC2Q8N394 836 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 FANCBQ8NB91 859 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 GIMAP8Q8ND71 665 aaPredicted RBP12.49□□□□□ -0.41
RNF220-217ENST00000496262 FBXO22Q8NEZ5 403 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 GLG1Q92896 1179 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 GPRASP2Q96D09 838 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 PGBD1Q96JS3 809 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 YME1L1Q96TA2 773 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 CHMP5Q9NZZ3 219 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 RAPGEFL1Q9UHV5 662 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 COG5Q9UP83 839 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 INSL6Q9Y581 213 aa12.49□□□□□ -0.41
RNF220-217ENST00000496262 GHRP10912 638 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 KCNA2P16389 499 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 COL9A1P20849 921 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 IGBP1P78318 339 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 NECTIN1Q15223 517 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 CDHR1Q96JP9 859 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 SENP7Q9BQF6 1050 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 IFIH1Q9BYX4 1025 aaKnown RBP12.48□□□□□ -0.41
RNF220-217ENST00000496262 C22orf23Q9BZE7 217 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
RNF220-217ENST00000496262 PCDHA6Q9UN73 950 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 PCDHA8Q9Y5H6 950 aa12.48□□□□□ -0.41
RNF220-217ENST00000496262 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
RNF220-217ENST00000496262 GSTTP1A0A1W2PQM5 241 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 CAND2O75155 1236 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 NAPAP54920 295 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
RNF220-217ENST00000496262 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
RNF220-217ENST00000496262 GRIK4Q16099 956 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 RNF20Q5VTR2 975 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 WWC2Q6AWC2 1192 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 SEPT1Q8WYJ6 367 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 ZBTB10Q96DT7 871 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 TUBE1Q9UJT0 475 aa12.47□□□□□ -0.41
RNF220-217ENST00000496262 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
RNF220-217ENST00000496262 CNTNAP5Q8WYK1 1306 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 GOLGA6L3A6NEY3 463 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 CSPG5O95196 566 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 CHRNA1P02708 482 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 MCM4P33991 863 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 HTRA4P83105 476 aaPredicted RBP12.46□□□□□ -0.41
RNF220-217ENST00000496262 EPC2Q52LR7 807 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 APOA5Q6Q788 366 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 APBB2Q92870 758 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 TOP1MTQ969P6 601 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 NEK1Q96PY6 1258 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 FAM49AQ9H0Q0 323 aaPredicted RBP12.46□□□□□ -0.41
RNF220-217ENST00000496262 EHMT1Q9H9B1 1298 aa12.46□□□□□ -0.41
RNF220-217ENST00000496262 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.41
RNF220-217ENST00000496262 ERAP1Q9NZ08 941 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms