RNA–Protein interactions for RNA: ENST00000495749.1

TM9SF4-207, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 3,023 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-207ENST00000495749 TMEM179Q6ZVK1 233 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SAMD7Q7Z3H4 446 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC125Q86Z20 511 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 PIGOQ8TEQ8 1089 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC42Q96M95 316 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 PSMB7Q99436 277 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SELENOOQ9BVL4 669 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 MMRN2Q9H8L6 949 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SERPINA10Q9UK55 444 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 PRR12Q9ULL5 1215 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 BCS1LQ9Y276 419 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 ZNF263O14978 683 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SORBS3O60504 671 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 MATR3P43243 847 aaKnown RBP eCLIP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 ARHGAP4P98171 946 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 PLS1Q14651 629 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 HERC4Q5GLZ8 1057 aaPredicted RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SYDE2Q5VT97 1194 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 DLK2Q6UY11 383 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC47Q96A33 483 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 DHTKD1Q96HY7 919 aaPredicted RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 NUP58Q9BVL2 599 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 AMNQ9BXJ7 453 aa10.05□□□□□ -0.8
TM9SF4-207ENST00000495749 SLX4Q8IY92 1834 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 TARSL2A2RTX5 802 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 SPDYE2BA6NHP3 402 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 SPDYE6P0CI01 402 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CCNE1P24864 410 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 PRPHP41219 470 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 ARID5AQ03989 594 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CXCL9Q07325 125 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 SPA17Q15506 151 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 RSBN1LQ6PCB5 846 aaPredicted RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CCNI2Q6ZMN8 369 aaPredicted RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC170Q8IYT3 715 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 NOC3LQ8WTT2 800 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 IDI2Q9BXS1 227 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 ZBTB21Q9ULJ3 1066 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 LAD1O00515 517 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 MED24O75448 989 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 AMPD3Q01432 767 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 MIIPQ5JXC2 388 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 GPBP1Q86WP2 473 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 RETREG2Q8NC44 543 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 HDAC7Q8WUI4 952 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 MYH1P12882 1939 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 ANO9A1A5B4 782 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 BICDL2A1A5D9 508 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 TRAF5O00463 557 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 MYL1P05976 194 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CXCR5P32302 372 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 NOVP48745 357 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 VAV2P52735 878 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CTTNQ14247 550 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 KSR1Q8IVT5 923 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 AK8Q96MA6 479 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 IFIH1Q9BYX4 1025 aaKnown RBP10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 MLXIPQ9HAP2 919 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 NLRC4Q9NPP4 1024 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 NYAP2Q9P242 653 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 CAPN6Q9Y6Q1 641 aa10.04□□□□□ -0.8
TM9SF4-207ENST00000495749 AGPSO00116 658 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 EPHB6O15197 1021 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 DNA2P51530 1060 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 FKBP15Q5T1M5 1219 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 TATDN1Q6P1N9 297 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 ZNF662Q6ZS27 426 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 NIM1KQ8IY84 436 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 ANKRD13CQ8N6S4 541 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 RAD54LQ92698 747 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 ESYT2A0FGR8 921 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 GOLGA6BA6NDN3 693 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 MOCS3O95396 460 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 SLC7A5Q01650 507 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 KCTD19Q17RG1 926 aaPredicted RBP10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 SND1Q7KZF4 910 aaKnown RBP eCLIP10.03□□□□□ -0.82e-14■■■■□ 23.6
TM9SF4-207ENST00000495749 CREG2Q8IUH2 290 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 FAM114A1Q8IWE2 563 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 TPH2Q8IWU9 490 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 AGBL1Q96MI9 1066 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 LRRC1Q9BTT6 524 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 DEF6Q9H4E7 631 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 PANK4Q9NVE7 773 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
TM9SF4-207ENST00000495749 SMCHD1A6NHR9 2005 aa10.02□□□□□ -0.8
TM9SF4-207ENST00000495749 USO1O60763 962 aaKnown RBP10.02□□□□□ -0.8
TM9SF4-207ENST00000495749 PPFIA4O75335 1185 aa10.02□□□□□ -0.8
TM9SF4-207ENST00000495749 TACC1O75410 805 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms