RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CLDND1Q9NY35 253 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 RWDD3Q9Y3V2 267 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 MUC6Q6W4X9 2439 aa20.27■□□□□ 0.84
TMEM53-209ENST00000495630 TROAPQ12815 778 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 CTC1Q2NKJ3 1217 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 UTP14CQ5TAP6 766 aaKnown RBP20.26■□□□□ 0.83
TMEM53-209ENST00000495630 TAF2Q6P1X5 1199 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 ADHFE1Q8IWW8 467 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 LMBR1Q8WVP7 490 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 C11orf84Q9BUA3 381 aaPredicted RBP20.26■□□□□ 0.83
TMEM53-209ENST00000495630 KCNH6Q9H252 994 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 EHMT1Q9H9B1 1298 aa20.26■□□□□ 0.83
TMEM53-209ENST00000495630 U3KPZ7 1027 aaPredicted RBP20.26■□□□□ 0.83
TMEM53-209ENST00000495630 LAMA4Q16363 1823 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 CTNNB1P35222 781 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 LTBRP36941 435 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 NLRX1Q86UT6 975 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 ALYREFQ86V81 257 aaKnown RBP20.25■□□□□ 0.83
TMEM53-209ENST00000495630 TRIM50Q86XT4 487 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 COL4A6Q14031 1691 aa20.25■□□□□ 0.83
TMEM53-209ENST00000495630 ENPP3O14638 875 aa20.24■□□□□ 0.83
TMEM53-209ENST00000495630 WTAPQ15007 396 aa20.24■□□□□ 0.83
TMEM53-209ENST00000495630 SART3Q15020 963 aaKnown RBP20.24■□□□□ 0.83
TMEM53-209ENST00000495630 RSPH3Q86UC2 560 aa20.24■□□□□ 0.83
TMEM53-209ENST00000495630 CLP1Q92989 425 aaKnown RBP20.24■□□□□ 0.83
TMEM53-209ENST00000495630 CUL5Q93034 780 aa20.24■□□□□ 0.83
TMEM53-209ENST00000495630 IL25Q9H293 177 aa20.24■□□□□ 0.83
TMEM53-209ENST00000495630 PIK3CDO00329 1044 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 GRM6O15303 877 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 CYP21A2P08686 494 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 LINC00271P0C7V0 271 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 CATIPQ7Z7H3 387 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 SMARCC2Q8TAQ2 1214 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 MAP3K14Q99558 947 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 SENP2Q9HC62 589 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 TELO2Q9Y4R8 837 aa20.23■□□□□ 0.83
TMEM53-209ENST00000495630 GHRP10912 638 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 SMARCA1P28370 1054 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 HYAL1Q12794 435 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 LPIN1Q14693 890 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 SMAD2Q15796 467 aaKnown RBP20.22■□□□□ 0.83
TMEM53-209ENST00000495630 NCOA7Q8NI08 942 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 SEPT1Q8WYJ6 367 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 ZNF689Q96CS4 500 aaPredicted RBP20.22■□□□□ 0.83
TMEM53-209ENST00000495630 CDHR1Q96JP9 859 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 PLVAPQ9BX97 442 aa20.22■□□□□ 0.83
TMEM53-209ENST00000495630 MEIS2O14770 477 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 TCF7P36402 384 aaPredicted RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 SP4Q02446 784 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 MGAT3Q09327 533 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 USP17L6PQ6QN14 398 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 RUFY4Q6ZNE9 571 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 RALYLQ86SE5 291 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 IGDCC4Q8TDY8 1250 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 PIBF1Q8WXW3 757 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 RRP36Q96EU6 259 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 POP1Q99575 1024 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 RC3H2Q9HBD1 1191 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 SUPT16HQ9Y5B9 1047 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 ADGRA3Q8IWK6 1321 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 BAZ2BQ9UIF8 2168 aaKnown RBP20.21■□□□□ 0.83
TMEM53-209ENST00000495630 MYO7AQ13402 2215 aa20.21■□□□□ 0.83
TMEM53-209ENST00000495630 MBLAC1A4D2B0 266 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-209ENST00000495630 DGKIO75912 1065 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 RPLP2P05387 115 aaKnown RBP20.2■□□□□ 0.82
TMEM53-209ENST00000495630 IRS1P35568 1242 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 PPFIA1Q13136 1202 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 BTG3Q14201 252 aaPredicted RBP20.2■□□□□ 0.82
TMEM53-209ENST00000495630 NAALADL2Q58DX5 795 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 GPRASP2Q96D09 838 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 SPZ1Q9BXG8 430 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 ERAP1Q9NZ08 941 aa20.2■□□□□ 0.82
TMEM53-209ENST00000495630 GSTTP1A0A1W2PQM5 241 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 E7EWF7 191 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 MBTPS2O43462 519 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 ATP9AO75110 1047 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 PTH1RQ03431 593 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 DLX2Q07687 328 aaPredicted RBP20.19■□□□□ 0.82
TMEM53-209ENST00000495630 GRIK4Q16099 956 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 FBXO47Q5MNV8 452 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 DNAJB3Q8WWF6 145 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 P2RX5Q93086 422 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 MFSD14AQ96MC6 490 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 FBXL18Q96ME1 805 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 LZTS2Q9BRK4 669 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 PLAGL2Q9UPG8 496 aa20.19■□□□□ 0.82
TMEM53-209ENST00000495630 MMP1P03956 469 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 KCNA2P16389 499 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 KIF5BP33176 963 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 MRE11P49959 708 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 NHLH1Q02575 133 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 ADAM15Q13444 863 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 HERC4Q5GLZ8 1057 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-209ENST00000495630 MARCH8Q5T0T0 291 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 TSHZ1Q6ZSZ6 1077 aa20.18■□□□□ 0.82
TMEM53-209ENST00000495630 CTCFLQ8NI51 663 aaPredicted RBP20.18■□□□□ 0.82
TMEM53-209ENST00000495630 GLG1Q92896 1179 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms