RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 C7orf43Q8WVR3 580 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 NUCKS1Q9H1E3 243 aaKnown RBP16.95■□□□□ 0.3
CALD1-222ENST00000495522 CEP72Q9P209 647 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 DNM3Q9UQ16 869 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 FAM86B1E9PN63 330 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 FAM86B2P0C5J1 330 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 VSNL1P62760 191 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 EDRF1Q3B7T1 1238 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 PRMT6Q96LA8 375 aaPredicted RBP16.95■□□□□ 0.3
CALD1-222ENST00000495522 SH2D4AQ9H788 454 aa16.95■□□□□ 0.3
CALD1-222ENST00000495522 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.95■□□□□ 0.3
CALD1-222ENST00000495522 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 TACC1O75410 805 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 HDXQ7Z353 690 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 SYT2Q8N9I0 419 aaPredicted RBP16.94■□□□□ 0.3
CALD1-222ENST00000495522 MMS19Q96T76 1030 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 ZHX3Q9H4I2 956 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 ABCB6Q9NP58 842 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 HERC5Q9UII4 1024 aaKnown RBP16.94■□□□□ 0.3
CALD1-222ENST00000495522 FAM184BQ9ULE4 1060 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 SSU72P8A0A1W2PR75 194 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 A0A1W2PRG0 241 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 PIK3CDO00329 1044 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 OPLAHO14841 1288 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 CYP3A4P08684 503 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 SPATA31C1P0DKV0 1188 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
CALD1-222ENST00000495522 GIT2Q14161 759 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 RRP1BQ14684 758 aaKnown RBP16.94■□□□□ 0.3
CALD1-222ENST00000495522 WDR93Q6P2C0 686 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 TXLNBQ8N3L3 684 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 SYN2Q92777 582 aaPredicted RBP16.94■□□□□ 0.3
CALD1-222ENST00000495522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.94■□□□□ 0.33e-13■■■■■ 29.2
CALD1-222ENST00000495522 TMOD2Q9NZR1 351 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 PRR12Q9ULL5 1215 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 JRKLQ9Y4A0 524 aa16.94■□□□□ 0.3
CALD1-222ENST00000495522 CETN3O15182 167 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 MSH4O15457 936 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 PPIP5K2O43314 1243 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 OAS2P29728 719 aaKnown RBP16.93■□□□□ 0.3
CALD1-222ENST00000495522 BAG6P46379 1132 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 PSMC6P62333 389 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 TRAF1Q13077 416 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
CALD1-222ENST00000495522 ADAM9Q13443 819 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 DEFB132Q7Z7B7 95 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 TEX2Q8IWB9 1127 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 CAPZA3Q96KX2 299 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 LSM14BQ9BX40 385 aaKnown RBP16.93■□□□□ 0.3
CALD1-222ENST00000495522 ARHGEF10LQ9HCE6 1279 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 TMEM51Q9NW97 253 aa16.93■□□□□ 0.3
CALD1-222ENST00000495522 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 MEIS1O00470 390 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 HOXA13P31271 388 aaPredicted RBP16.92■□□□□ 0.3
CALD1-222ENST00000495522 ZNF76P36508 570 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 MAGEA1P43355 309 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 USP14P54578 494 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
CALD1-222ENST00000495522 FAM83BQ5T0W9 1011 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 SPICE1Q8N0Z3 855 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
CALD1-222ENST00000495522 JADE2Q9NQC1 790 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 VAV3Q9UKW4 847 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 L1RE1Q9UN81 338 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
CALD1-222ENST00000495522 PJA2O43164 708 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 NOL4O94818 638 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 TAL1P17542 331 aaPredicted RBP16.92■□□□□ 0.3
CALD1-222ENST00000495522 MCM3P25205 808 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 STAT2P52630 851 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 SFMBT2Q5VUG0 894 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 HGSNATQ68CP4 663 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 ALS2CR12Q96Q35 445 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 REEP2Q9BRK0 252 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 NLRC4Q9NPP4 1024 aa16.92■□□□□ 0.3
CALD1-222ENST00000495522 EPS15P42566 896 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 GPS2Q13227 327 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 SLC9C1Q4G0N8 1177 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 IQCEQ6IPM2 695 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 POLR3CQ9BUI4 534 aaPredicted RBP16.91■□□□□ 0.3
CALD1-222ENST00000495522 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 SNX12Q9UMY4 172 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 CAPN6Q9Y6Q1 641 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 SERPING1P05155 500 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 NR2F2P24468 414 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 TDRD12Q587J7 1177 aaKnown RBP16.91■□□□□ 0.3
CALD1-222ENST00000495522 EPM2AIP1Q7L775 607 aaPredicted RBP16.91■□□□□ 0.3
CALD1-222ENST00000495522 SFR1Q86XK3 245 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 KCTD17Q8N5Z5 321 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 GOPCQ9HD26 462 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
CALD1-222ENST00000495522 ATAD5Q96QE3 1844 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 TARSL2A2RTX5 802 aaKnown RBP16.9■□□□□ 0.3
CALD1-222ENST00000495522 TCP10L2B9ZVM9 353 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 RBAK-RBAKDNI3L0D1 243 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 MOCS3O95396 460 aa16.9■□□□□ 0.3
CALD1-222ENST00000495522 ECE1P42892 770 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms