RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 FXR1P51114 621 aaKnown RBP eCLIP18.2■□□□□ 0.5
CBX4-204ENST00000495122 TERF1P54274 439 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 UBASH3AP57075 661 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 UBE2SQ16763 222 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 Q4G0T1 1027 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 HYIQ5T013 277 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 KRT79Q5XKE5 535 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 CRYGNQ8WXF5 182 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 MOV10L1Q9BXT6 1211 aaKnown RBP18.2■□□□□ 0.5
CBX4-204ENST00000495122 NT5C3AQ9H0P0 336 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 KCNF1Q9H3M0 494 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 RTN4Q9NQC3 1192 aaKnown RBP18.2■□□□□ 0.5
CBX4-204ENST00000495122 HOXC10Q9NYD6 342 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 NR2E3Q9Y5X4 410 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 IVNS1ABPQ9Y6Y0 642 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 ABCB11O95342 1321 aa18.2■□□□□ 0.5
CBX4-204ENST00000495122 SPDYE3A6NKU9 549 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 PPP1R3GB7ZBB8 358 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 TDP2O95551 362 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 FDX1P10109 184 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 PLCG1P19174 1290 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 SPICE1Q8N0Z3 855 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 MB21D1Q8N884 522 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 SHCBP1Q8NEM2 672 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 CDK5RAP3Q96JB5 506 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 MTRQ99707 1265 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 SPATC1LQ9H0A9 340 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 PRO3102Q9H379 93 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 KCNMB3Q9NPA1 279 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 FANCLQ9NW38 375 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
CBX4-204ENST00000495122 LCTP09848 1927 aa18.19■□□□□ 0.5
CBX4-204ENST00000495122 SLC37A4O43826 429 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 EDIL3O43854 480 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 EVI5O60447 810 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 FLOT1O75955 427 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 IGHA2P01877 340 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 TECP42680 631 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 TXKP42681 527 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 PAK1Q13153 545 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 CDKAL1Q5VV42 579 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 LRRC8AQ8IWT6 810 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 NPLOC4Q8TAT6 608 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 NOC3LQ8WTT2 800 aaKnown RBP18.18■□□□□ 0.5
CBX4-204ENST00000495122 ATG4CQ96DT6 458 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 KCND1Q9NSA2 647 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 LRRC37A2A6NM11 1700 aa18.18■□□□□ 0.5
CBX4-204ENST00000495122 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 MARCH6O60337 910 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 CDK11BP21127 795 aaKnown RBP18.17■□□□□ 0.5
CBX4-204ENST00000495122 ARHGAP4P98171 946 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 NOLC1Q14978 699 aaKnown RBP eCLIP18.17■□□□□ 0.5
CBX4-204ENST00000495122 TMEM119Q4V9L6 283 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 LHX8Q68G74 356 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 FOXR2Q6PJQ5 311 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 SV2BQ7L1I2 683 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 VSTM4Q8IW00 320 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 CCDC112Q8NEF3 446 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 ANKRD20A12PQ8NF67 263 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 NUP88Q99567 741 aaPredicted RBP18.17■□□□□ 0.5
CBX4-204ENST00000495122 MMTAG2Q9BU76 263 aaKnown RBP18.17■□□□□ 0.5
CBX4-204ENST00000495122 C11orf49Q9H6J7 331 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 PFASO15067 1338 aa18.17■□□□□ 0.5
CBX4-204ENST00000495122 SZT2Q5T011 3432 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 PP2D1A8MPX8 630 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 ERCC3P19447 782 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 ADORA2AP29274 412 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 FILIP1LQ4L180 1135 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 MFSD14CQ5VZR4 134 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 USP17L6PQ6QN14 398 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 GIMAP8Q8ND71 665 aaPredicted RBP18.16■□□□□ 0.5
CBX4-204ENST00000495122 DHTKD1Q96HY7 919 aaPredicted RBP18.16■□□□□ 0.5
CBX4-204ENST00000495122 TRIM9Q9C026 710 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 MAP3K20Q9NYL2 800 aaKnown RBP18.16■□□□□ 0.5
CBX4-204ENST00000495122 PCDHA12Q9UN75 941 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 ADAMTS5Q9UNA0 930 aa18.16■□□□□ 0.5
CBX4-204ENST00000495122 PSMA7O14818 248 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 STRNO43815 780 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 KLRC4O43908 158 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 ATP1A3P13637 1013 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 SFPQP23246 707 aaKnown RBP eCLIP18.15■□□□□ 0.5
CBX4-204ENST00000495122 CDC25AP30304 524 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 GHRHRQ02643 423 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 GRB10Q13322 594 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 HAUS3Q68CZ6 603 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 TMC6Q7Z403 805 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 ADSSL1Q8N142 457 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 ERMNQ8TAM6 284 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 SNX29Q8TEQ0 813 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 LARP4BQ92615 738 aaKnown RBP18.15■□□□□ 0.5
CBX4-204ENST00000495122 HAS1Q92839 578 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 MAF1Q9H063 256 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 BLZF1Q9H2G9 400 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 MROH8Q9H579 483 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 EXOC1Q9NV70 894 aa18.15■□□□□ 0.5
CBX4-204ENST00000495122 FBXO28Q9NVF7 368 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms