RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 GAS2L3Q86XJ1 694 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 CATSPER3Q86XQ3 398 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 GRAMD1CQ8IYS0 662 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 TRIML1Q8N9V2 468 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 GIMAP8Q8ND71 665 aaPredicted RBP12.35□□□□□ -0.43
PKP4-215ENST00000494945 LRRC15Q8TF66 581 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 LARP4BQ92615 738 aaKnown RBP12.35□□□□□ -0.43
PKP4-215ENST00000494945 RAD54LQ92698 747 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
PKP4-215ENST00000494945 GSDMAQ96QA5 445 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 SENP7Q9BQF6 1050 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 KIAA1024Q9UPX6 916 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 EVPLQ92817 2033 aa12.35□□□□□ -0.43
PKP4-215ENST00000494945 WDR64B1ANS9 1081 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
PKP4-215ENST00000494945 COBLO75128 1261 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 ECM1Q16610 540 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 CNNM4Q6P4Q7 775 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 MAMDC4Q6UXC1 1216 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 DPP9Q86TI2 863 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
PKP4-215ENST00000494945 MSL3Q8N5Y2 521 aaKnown RBP12.34□□□□□ -0.43
PKP4-215ENST00000494945 MTRQ99707 1265 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 C7orf25Q9BPX7 421 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
PKP4-215ENST00000494945 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
PKP4-215ENST00000494945 POTEFA5A3E0 1075 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 AOC2O75106 756 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 SLITRK3O94933 977 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 P4HBP07237 508 aaKnown RBP12.33□□□□□ -0.44
PKP4-215ENST00000494945 MAP2K2P36507 400 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 CYP4A11Q02928 519 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 CUL4BQ13620 913 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 NEDD9Q14511 834 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 ANO6Q4KMQ2 910 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 MORN1Q5T089 497 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 POTEGQ6S5H5 508 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 SEPT14Q6ZU15 432 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 ARMCX2Q7L311 632 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 KCNK18Q7Z418 384 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 STAMQ92783 540 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 DYDC2Q96IM9 177 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 CFHR5Q9BXR6 569 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 NAT10Q9H0A0 1025 aaKnown RBP12.33□□□□□ -0.44
PKP4-215ENST00000494945 JPH1Q9HDC5 661 aaPredicted RBP12.33□□□□□ -0.44
PKP4-215ENST00000494945 VTA1Q9NP79 307 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 SLC9A2Q9UBY0 812 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 DNM3Q9UQ16 869 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 SYNGAP1Q96PV0 1343 aa12.33□□□□□ -0.44
PKP4-215ENST00000494945 FRMPD3Q5JV73 1810 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 E9PMD0 336 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 BIN1O00499 593 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
PKP4-215ENST00000494945 EYA4O95677 639 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 CCNE2O96020 404 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 HOXC6P09630 235 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 PLA2G4BP0C869 781 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 QARSP47897 775 aaKnown RBP12.32□□□□□ -0.44
PKP4-215ENST00000494945 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 MORC3Q14149 939 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 CTTNQ14247 550 aaKnown RBP12.32□□□□□ -0.44
PKP4-215ENST00000494945 MCM6Q14566 821 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 KCNB1Q14721 858 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 L1TD1Q5T7N2 865 aaKnown RBP12.32□□□□□ -0.44
PKP4-215ENST00000494945 SOCS4Q8WXH5 440 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
PKP4-215ENST00000494945 MAML3Q96JK9 1138 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 NACC1Q96RE7 527 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 LXNQ9BS40 222 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 GTPBP4Q9BZE4 634 aaKnown RBP12.32□□□□□ -0.44
PKP4-215ENST00000494945 TRIM9Q9C026 710 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 RBSNQ9H1K0 784 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 ZSWIM4Q9H7M6 989 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 SAMM50Q9Y512 469 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 PCDHA10Q9Y5I2 948 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 SIP14410 1827 aa12.32□□□□□ -0.44
PKP4-215ENST00000494945 RBM47A0AV96 593 aaKnown RBP12.31□□□□□ -0.44
PKP4-215ENST00000494945 MYMKA6NI61 221 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 LYPLA2O95372 231 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
PKP4-215ENST00000494945 PSAPP07602 524 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 XRCC6P12956 609 aaKnown RBP eCLIP12.31□□□□□ -0.44
PKP4-215ENST00000494945 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
PKP4-215ENST00000494945 CASP1P29466 404 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 RGS2P41220 211 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 MRE11P49959 708 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 SP2Q02086 613 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 IRF5Q13568 498 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 TTLL4Q14679 1199 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 METTL7BQ6UX53 244 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 TPH2Q8IWU9 490 aa12.31□□□□□ -0.44
PKP4-215ENST00000494945 FBXO16Q8IX29 292 aaPredicted RBP12.31□□□□□ -0.44
PKP4-215ENST00000494945 SYT2Q8N9I0 419 aaPredicted RBP12.31□□□□□ -0.44
PKP4-215ENST00000494945 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms