RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 NIP7Q9Y221 180 aaKnown RBP eCLIP16.86■□□□□ 0.29
SDF4-207ENST00000494748 CEP83Q9Y592 693 aa16.86■□□□□ 0.29
SDF4-207ENST00000494748 COL5A3P25940 1745 aaPredicted RBP16.85■□□□□ 0.29
SDF4-207ENST00000494748 SMCO2A6NFE2 343 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 F8W031 263 aaPredicted RBP16.85■□□□□ 0.29
SDF4-207ENST00000494748 TXKP42681 527 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 EVA1CP58658 441 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 NEDD9Q14511 834 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 PARP9Q8IXQ6 854 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 CCT6BQ92526 530 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 KANSL2Q9H9L4 492 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 FBXL5Q9UKA1 691 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 TPX2Q9ULW0 747 aaKnown RBP16.85■□□□□ 0.29
SDF4-207ENST00000494748 PCDHA2Q9Y5H9 948 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 NAPAP54920 295 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 PPP2R2AP63151 447 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 ARFGAP2Q8N6H7 521 aa16.85■□□□□ 0.29
SDF4-207ENST00000494748 POTEMA6NI47 508 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 KCNK3O14649 394 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 ELF1P32519 619 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 SCTRP47872 440 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 XRCC4Q13426 336 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 DNAAF5Q86Y56 855 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 ZC3H3Q8IXZ2 948 aaKnown RBP16.84■□□□□ 0.29
SDF4-207ENST00000494748 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 TXLNGYQ9BZA5 131 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 KLRF2D3W0D1 207 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 DRD4P21917 467 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 CRKLP46109 303 aaKnown RBP16.84■□□□□ 0.29
SDF4-207ENST00000494748 PSMD2Q13200 908 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 ORC2Q13416 577 aaPredicted RBP16.84■□□□□ 0.29
SDF4-207ENST00000494748 CCDC121Q6ZUS5 278 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 TMC3Q7Z5M5 1100 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 SGSM3Q96HU1 749 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 CCDC87Q9NVE4 849 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 OPLAHO14841 1288 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 SART1O43290 800 aaKnown RBP16.84■□□□□ 0.29
SDF4-207ENST00000494748 CTNNA1P35221 906 aaKnown RBP16.84■□□□□ 0.29
SDF4-207ENST00000494748 COASYQ13057 564 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 IRS2Q9Y4H2 1338 aa16.84■□□□□ 0.29
SDF4-207ENST00000494748 FKBP3Q00688 224 aaKnown RBP16.83■□□□□ 0.29
SDF4-207ENST00000494748 HLTFQ14527 1009 aaKnown RBP eCLIP16.83■□□□□ 0.29
SDF4-207ENST00000494748 TLDC1Q6P9B6 456 aa16.83■□□□□ 0.29
SDF4-207ENST00000494748 CALR3Q96L12 384 aaKnown RBP16.83■□□□□ 0.29
SDF4-207ENST00000494748 AP1M1Q9BXS5 423 aa16.83■□□□□ 0.29
SDF4-207ENST00000494748 ITGA4P13612 1032 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 SF3B3Q15393 1217 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 ZNF571Q7Z3V5 609 aaPredicted RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 RASGEF1CQ8N431 466 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 METTL13Q8N6R0 699 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 CELF1Q92879 486 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 TLCD1Q96CP7 247 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 CCDC114Q96M63 670 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 KIF1CO43896 1103 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 POU5F1Q01860 360 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 PTK2Q05397 1052 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 RPS6KA1Q15418 735 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 SNCBQ16143 134 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 MYOCDQ8IZQ8 938 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 PBKQ96KB5 322 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 DDX47Q9H0S4 455 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 CENPHQ9H3R5 247 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 MTMR7Q9Y216 660 aa16.83■□□□□ 0.28
SDF4-207ENST00000494748 NOC2LQ9Y3T9 749 aaKnown RBP16.83■□□□□ 0.28
SDF4-207ENST00000494748 MGRN1O60291 552 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 TDP2O95551 362 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 MRPL12P52815 198 aaKnown RBP16.82■□□□□ 0.28
SDF4-207ENST00000494748 RAPGEF1Q13905 1077 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 ERFEQ4G0M1 354 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 SLFN11Q7Z7L1 901 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 LRRC45Q96CN5 670 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 EPB41L4BQ9H329 900 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 GOLGA6L10A6NI86 522 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 RASA1P20936 1047 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 ARID5AQ03989 594 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 KLHL30Q0D2K2 578 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 OLIG1Q8TAK6 271 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 ATP8B4Q8TF62 1192 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 KCTD10Q9H3F6 313 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 NOVA2Q9UNW9 492 aaKnown RBP16.82■□□□□ 0.28
SDF4-207ENST00000494748 F8VZ95 297 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 CALCRLQ16602 461 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 CEP63Q96MT8 703 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 TSG101Q99816 390 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 LZTS2Q9BRK4 669 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.82■□□□□ 0.28
SDF4-207ENST00000494748 C6orf50Q9HD87 102 aa16.82■□□□□ 0.28
SDF4-207ENST00000494748 PHF20L1A8MW92 1017 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 DAPK3O43293 454 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 DNAJC8O75937 253 aaPredicted RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 SCP2P22307 547 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 HOXA7P31268 230 aaPredicted RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 LUC7LQ9NQ29 371 aaKnown RBP16.81■□□□□ 0.28
SDF4-207ENST00000494748 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
SDF4-207ENST00000494748 NT5C2P49902 561 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms