RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 C17orf102A2RUQ5 167 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 MEIS1O00470 390 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 MAFGO15525 162 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 EIF5BO60841 1220 aaKnown RBP16.74■□□□□ 0.27
ATG4B-224ENST00000494132 IQCF3P0C7M6 154 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 BFSP2Q13515 415 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 TEX2Q8IWB9 1127 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 BICD2Q8TD16 824 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 SDF4Q9BRK5 362 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 SH3GLB2Q9NR46 395 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 SETD4Q9NVD3 440 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 SLC9A2Q9UBY0 812 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
ATG4B-224ENST00000494132 PCDHA4Q9UN74 947 aa16.74■□□□□ 0.27
ATG4B-224ENST00000494132 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 TREHO43280 583 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 CDKL5O76039 1030 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 FGBP02675 491 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 FOSBP53539 338 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 DEFB123Q8N688 67 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 GLG1Q92896 1179 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 ATP6V0A1Q93050 837 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 GTF3C6Q969F1 213 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 PCYT2Q99447 389 aa16.73■□□□□ 0.27
ATG4B-224ENST00000494132 NFASCO94856 1347 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 MICAL3Q7RTP6 2002 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 ZBBXA8MT70 800 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 EDIL3O43854 480 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 CYP3A4P08684 503 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 CKBP12277 381 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 ACTR2P61160 394 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 ST3GAL1Q11201 340 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 NPY5RQ15761 445 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 PRR16Q569H4 304 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 LRRC8DQ7L1W4 858 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 RPUSD2Q8IZ73 545 aaKnown RBP16.72■□□□□ 0.27
ATG4B-224ENST00000494132 BLIDQ8IZY5 108 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 CCDC155Q8N6L0 562 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 CAGE1Q8TC20 777 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 LMBR1Q8WVP7 490 aa16.72■□□□□ 0.27
ATG4B-224ENST00000494132 FTOQ9C0B1 505 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-224ENST00000494132 ORC3Q9UBD5 711 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-224ENST00000494132 LAMA2P24043 3122 aaKnown RBP16.72■□□□□ 0.27
ATG4B-224ENST00000494132 STK36Q9NRP7 1315 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 JAK2O60674 1132 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 CCNE2O96020 404 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 SELPP16109 830 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 PBX2P40425 430 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 PTK7Q13308 1070 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 TRIM71Q2Q1W2 868 aaKnown RBP16.71■□□□□ 0.27
ATG4B-224ENST00000494132 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 RASIP1Q5U651 963 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 MCTP2Q6DN12 878 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 TBCKQ8TEA7 893 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 AFAP1L1Q8TED9 768 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 HERVK_113Q902F9 699 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 GJA10Q969M2 543 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 ZBTB10Q96DT7 871 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 KIF2CQ99661 725 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 ZNF577Q9BSK1 485 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 C22orf23Q9BZE7 217 aa16.71■□□□□ 0.27
ATG4B-224ENST00000494132 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-224ENST00000494132 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-224ENST00000494132 IPO5O00410 1097 aaKnown RBP16.7■□□□□ 0.26
ATG4B-224ENST00000494132 DHX15O43143 795 aaKnown RBP16.7■□□□□ 0.26
ATG4B-224ENST00000494132 CTSHP09668 335 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 FDPSP14324 419 aaKnown RBP16.7■□□□□ 0.26
ATG4B-224ENST00000494132 HOXC8P31273 242 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 THPOP40225 353 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 IGBP1P78318 339 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 GPNMBQ14956 572 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 NIPA1Q7RTP0 329 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 SERINC5Q86VE9 423 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 LENG9Q96B70 501 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 SMARCAD1Q9H4L7 1026 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 ERAP1Q9NZ08 941 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
ATG4B-224ENST00000494132 M0R2N6 131 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 NBNO60934 754 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 LGR5O75473 907 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 TDP2O95551 362 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 SMAD3P84022 425 aaKnown RBP16.69■□□□□ 0.26
ATG4B-224ENST00000494132 SETQ01105 290 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-224ENST00000494132 PPFIA1Q13136 1202 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 MBTPS1Q14703 1052 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 INF2Q27J81 1249 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 TCTN1Q2MV58 587 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 ZNF697Q5TEC3 545 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 TRAF7Q6Q0C0 670 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 DAGLBQ8NCG7 672 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 NSUN7Q8NE18 718 aaKnown RBP16.69■□□□□ 0.26
ATG4B-224ENST00000494132 OXER1Q8TDS5 423 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 PHF20Q9BVI0 1012 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 AZI2Q9H6S1 392 aa16.69■□□□□ 0.26
ATG4B-224ENST00000494132 DNAJB2P25686 324 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 CIITAP33076 1130 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 RFC2P35250 354 aa16.68■□□□□ 0.26
ATG4B-224ENST00000494132 RABGGTBP53611 331 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms