RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 NXNQ6DKJ4 435 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 FBXO38Q6PIJ6 1188 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 RFX6Q8HWS3 928 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 LRFN2Q9ULH4 789 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 ATP8A1Q9Y2Q0 1164 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 PLEKHA8P1O95397 391 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 CLTAP09496 248 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 NPR1P16066 1061 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 XPAP23025 273 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-207ENST00000494090 SGO2Q562F6 1265 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 RTKN2Q8IZC4 609 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 MAD1L1Q9Y6D9 718 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 IFT88Q13099 833 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 CNOT10Q9H9A5 744 aaKnown RBP20.72■□□□□ 0.91
COL27A1-207ENST00000494090 RCAN1P53805 252 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 ZNF449Q6P9G9 518 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 FMR1NBQ8N0W7 255 aaPredicted RBP20.72■□□□□ 0.91
COL27A1-207ENST00000494090 CCHCR1Q8TD31 782 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 PIGBQ92521 554 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 COA1Q9GZY4 146 aa20.72■□□□□ 0.91
COL27A1-207ENST00000494090 PSAPP07602 524 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 INHBAP08476 426 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 ZSCAN20P17040 1043 aaPredicted RBP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 IREB2P48200 963 aaKnown RBP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 GRAPQ13588 217 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 KRT27Q7Z3Y8 459 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 LAMC1P11047 1609 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 YWHAGP61981 247 aaKnown RBP eCLIP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 DHX9Q08211 1270 aaKnown RBP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 DBN1Q16643 649 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 RAB44Q7Z6P3 723 aaPredicted RBP20.71■□□□□ 0.91
COL27A1-207ENST00000494090 GOLPH3LQ9H4A5 285 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 PARVGQ9HBI0 331 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 POC1B-GALNT4F8VUJ3 575 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 MEIS1O00470 390 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 UBXN2AP68543 259 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 CYP27A1Q02318 531 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 NNTQ13423 1086 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 SUSD4Q5VX71 490 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 TBC1D10CQ8IV04 446 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 TTC1Q99614 292 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 ABCB6Q9NP58 842 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 USP17L3A6NCW0 530 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 USP17L4A6NCW7 530 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 ARID5BQ14865 1188 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 USP17L1Q7RTZ2 530 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 MTA3Q9BTC8 594 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 APOL6Q9BWW8 343 aa20.71■□□□□ 0.91
COL27A1-207ENST00000494090 LRRN2O75325 713 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 IFNAR2P48551 515 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 MYO1EQ12965 1108 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 SLMAPQ14BN4 828 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 EVI5O60447 810 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 CDK8P49336 464 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 CLEC4GQ6UXB4 293 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 Q9H521 79 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 SGK1O00141 431 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 ECE1P42892 770 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 KPNA2P52292 529 aaKnown RBP20.7■□□□□ 0.9
COL27A1-207ENST00000494090 TTBK2Q6IQ55 1244 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 GBP5Q96PP8 586 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 ARL4AP40617 200 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 SH3BGRP55822 239 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-207ENST00000494090 MICAL1Q8TDZ2 1067 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 UBE2TQ9NPD8 197 aaPredicted RBP20.7■□□□□ 0.9
COL27A1-207ENST00000494090 BCORL1Q5H9F3 1711 aa20.7■□□□□ 0.9
COL27A1-207ENST00000494090 PNMA6AP0CW24 399 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-207ENST00000494090 PDE1BQ01064 536 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 RNASELQ05823 741 aaKnown RBP20.69■□□□□ 0.9
COL27A1-207ENST00000494090 OSBPL5Q9H0X9 879 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-207ENST00000494090 ZCCHC11Q5TAX3 1644 aaKnown RBP20.69■□□□□ 0.9
COL27A1-207ENST00000494090 GPC4O75487 556 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 FAM149B1Q96BN6 582 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 DBNDD1Q9H9R9 158 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 EFCC1Q9HA90 598 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 NEDD4P46934 1319 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 CDC42BPGQ6DT37 1551 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 EMBQ6PCB8 327 aa20.69■□□□□ 0.9
COL27A1-207ENST00000494090 MB21D2Q8IYB1 491 aaPredicted RBP20.69■□□□□ 0.9
COL27A1-207ENST00000494090 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 UBE2SQ16763 222 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 ARHGEF18Q6ZSZ5 1173 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■■■■■ 34.4
COL27A1-207ENST00000494090 PCIF1Q9H4Z3 704 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 SLC38A10Q9HBR0 1119 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 EIF3BP55884 814 aaKnown RBP20.68■□□□□ 0.9
COL27A1-207ENST00000494090 UNC13DQ70J99 1090 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 PDLIM2Q96JY6 352 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 PNMA3Q9UL41 463 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CLTCL1P53675 1640 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 MCF2LO15068 1137 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 GDF11O95390 407 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 CYB5R4Q7L1T6 521 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 HDAC11Q96DB2 347 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 GJB4Q9NTQ9 266 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 GDAQ9Y2T3 454 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 MED14O60244 1454 aa20.68■□□□□ 0.9
COL27A1-207ENST00000494090 A0A087WUV0 522 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms