RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 FAM126BQ8IXS8 530 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 WASF1Q92558 559 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 TNFRSF25Q93038 417 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 GJA10Q969M2 543 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 LENG9Q96B70 501 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 TRIM43Q96BQ3 446 aaPredicted RBP13.27□□□□□ -0.29
UBA3-211ENST00000493957 GPR20Q99678 358 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 LLPHQ9BRT6 129 aaKnown RBP13.27□□□□□ -0.29
UBA3-211ENST00000493957 PRDM5Q9NQX1 630 aaPredicted RBP13.27□□□□□ -0.29
UBA3-211ENST00000493957 BOLA1Q9Y3E2 137 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 NR2E3Q9Y5X4 410 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 SIP14410 1827 aa13.27□□□□□ -0.29
UBA3-211ENST00000493957 GSTTP1A0A1W2PQM5 241 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 DDX39AO00148 427 aaKnown RBP13.26□□□□□ -0.29
UBA3-211ENST00000493957 B4GALT4O60513 344 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 CABYRO75952 493 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 TDP2O95551 362 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 LGALS2P05162 132 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 CIITAP33076 1130 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 NEDD9Q14511 834 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 GSE1Q14687 1217 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 DGKDQ16760 1214 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 PRR16Q569H4 304 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 BRDTQ58F21 947 aaPredicted RBP13.26□□□□□ -0.29
UBA3-211ENST00000493957 GALNT17Q6IS24 598 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 ANKRD33Q7Z3H0 272 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 SENP7Q9BQF6 1050 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 TRPV6Q9H1D0 765 aa13.26□□□□□ -0.29
UBA3-211ENST00000493957 BTBD18B2RXH4 712 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 NOP56O00567 594 aaKnown RBP13.25□□□□□ -0.29
UBA3-211ENST00000493957 WNT7AO00755 349 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 F2P00734 622 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 CD4P01730 458 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 MMP1P03956 469 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 CLTBP09497 229 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 XBP1P17861 261 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 KRT2P35908 639 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 PSEN2P49810 448 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 HIC1Q14526 733 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 NONOQ15233 471 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBA3-211ENST00000493957 FAM47CQ5HY64 1035 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
UBA3-211ENST00000493957 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 PIK3AP1Q6ZUJ8 805 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 NIPA1Q7RTP0 329 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 KRT25Q7Z3Z0 450 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 FAM177A1Q8N128 213 aaPredicted RBP13.25□□□□□ -0.29
UBA3-211ENST00000493957 CDHR1Q96JP9 859 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 C16orf70Q9BSU1 422 aa13.25□□□□□ -0.29
UBA3-211ENST00000493957 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
UBA3-211ENST00000493957 NFASCO94856 1347 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 UMODL1Q5DID0 1318 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 HAS3O00219 553 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 DHX15O43143 795 aaKnown RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 KPNA6O60684 536 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 CCNE2O96020 404 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 CHRM1P11229 460 aaPredicted RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 TCF7P36402 384 aaPredicted RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 MDM2Q00987 491 aaPredicted RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 MFSD10Q14728 455 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 DIS3L2Q8IYB7 885 aaKnown RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 TOX2Q96NM4 488 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 PCYT2Q99447 389 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 JPH1Q9HDC5 661 aaPredicted RBP13.24□□□□□ -0.29
UBA3-211ENST00000493957 TBX21Q9UL17 535 aa13.24□□□□□ -0.29
UBA3-211ENST00000493957 MYH15Q9Y2K3 1946 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 GBF1Q92538 1859 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 CCDC194A0A1B0GVG4 234 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 DCDC2CA8MYV0 355 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 MSH4O15457 936 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 SLC37A4O43826 429 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 PPFIA4O75335 1185 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 CYP2C9P11712 490 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 USP11P51784 963 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 HMGN5P82970 282 aaKnown RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 ZNF200P98182 395 aaPredicted RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 KIAA0753Q2KHM9 967 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 LETM2Q2VYF4 491 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 GDF6Q6KF10 455 aaPredicted RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 GIMAP8Q8ND71 665 aaPredicted RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 C8orf76Q96K31 380 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 ZNF577Q9BSK1 485 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 TMEM39AQ9NV64 488 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 HDAC6Q9UBN7 1215 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 SLC9A2Q9UBY0 812 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 RANBP2P49792 3224 aaKnown RBP13.23□□□□□ -0.29
UBA3-211ENST00000493957 ARID2Q68CP9 1835 aa13.23□□□□□ -0.29
UBA3-211ENST00000493957 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 PTPRSQ13332 1948 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 KIF28PB7ZC32 967 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 H3BRB1 525 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 MAFGO15525 162 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 GJB2P29033 226 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 MCM2P49736 904 aa13.22□□□□□ -0.29
UBA3-211ENST00000493957 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
UBA3-211ENST00000493957 ACTR2P61160 394 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms