RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 LPXNO60711 386 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 KCNA2P16389 499 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 TCF7P36402 384 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-208ENST00000493601 ERVK-21P61565 698 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 ARHGAP4P98171 946 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 TFF2Q03403 129 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 MTMR1Q13613 665 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 UBE2SQ16763 222 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 FAM117BQ6P1L5 589 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.07■□□□□ 0.644e-8■■■■■ 34.6
PTPRU-208ENST00000493601 CENPQQ7L2Z9 268 aaPredicted RBP19.07■□□□□ 0.64
PTPRU-208ENST00000493601 MYOCDQ8IZQ8 938 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 GDPD5Q8WTR4 605 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 RBM28Q9NW13 759 aaKnown RBP19.07■□□□□ 0.64
PTPRU-208ENST00000493601 LMCD1Q9NZU5 365 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 MTUS1Q9ULD2 1270 aa19.07■□□□□ 0.64
PTPRU-208ENST00000493601 NCOR1O75376 2440 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 COL4A6Q14031 1691 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 ITGB5P18084 799 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 APOA5Q6Q788 366 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 TEX2Q8IWB9 1127 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 APBB2Q92870 758 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 TELO2Q9Y4R8 837 aa19.06■□□□□ 0.64
PTPRU-208ENST00000493601 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 ADAM17P78536 824 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 TAF2Q6P1X5 1199 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 SEPT1Q8WYJ6 367 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 NEK1Q96PY6 1258 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 ERAP1Q9NZ08 941 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 PCDHA6Q9UN73 950 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 PCDHA8Q9Y5H6 950 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 UBIAD1Q9Y5Z9 338 aa19.05■□□□□ 0.64
PTPRU-208ENST00000493601 TCF20Q9UGU0 1960 aaKnown RBP19.04■□□□□ 0.64
PTPRU-208ENST00000493601 MAFGO15525 162 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 ATP9AO75110 1047 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 BMP1P13497 986 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 KCNQ1P51787 676 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 HTRA4P83105 476 aaPredicted RBP19.04■□□□□ 0.64
PTPRU-208ENST00000493601 FAM26DQ5JW98 314 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 PPP1R18Q6NYC8 613 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 HLA-CQ95604 372 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 SUGCTQ9HAC7 445 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 JADE2Q9NQC1 790 aa19.04■□□□□ 0.64
PTPRU-208ENST00000493601 NLRC5Q86WI3 1866 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 ZBTB43O43298 467 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 NAPAP54920 295 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 PPFIA1Q13136 1202 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 KRT32Q14532 448 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 RTN1Q16799 776 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 WWC2Q6AWC2 1192 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 DHX32Q7L7V1 743 aaKnown RBP19.03■□□□□ 0.64
PTPRU-208ENST00000493601 RPAINQ86UA6 219 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 RSPH3Q86UC2 560 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 FBXO22Q8NEZ5 403 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 SP7Q8TDD2 431 aaPredicted RBP19.03■□□□□ 0.64
PTPRU-208ENST00000493601 GLG1Q92896 1179 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 IFIH1Q9BYX4 1025 aaKnown RBP19.03■□□□□ 0.64
PTPRU-208ENST00000493601 SMARCAD1Q9H4L7 1026 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 TUBE1Q9UJT0 475 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 RALGAPA2Q2PPJ7 1873 aa19.03■□□□□ 0.64
PTPRU-208ENST00000493601 GSTTP1A0A1W2PQM5 241 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 hCG_1984214I3L0E3 225 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 CDC45O75419 566 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 MARK3P27448 753 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 GRIK4Q16099 956 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 ZNF713Q8N859 430 aaPredicted RBP19.02■□□□□ 0.64
PTPRU-208ENST00000493601 TOP1MTQ969P6 601 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 SAMD11Q96NU1 681 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 YME1L1Q96TA2 773 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
PTPRU-208ENST00000493601 RIC8AQ9NPQ8 531 aa19.02■□□□□ 0.64
PTPRU-208ENST00000493601 RBAK-RBAKDNI3L0D1 243 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 FOSP01100 380 aaPredicted RBP19.01■□□□□ 0.63
PTPRU-208ENST00000493601 RPLP2P05387 115 aaKnown RBP19.01■□□□□ 0.63
PTPRU-208ENST00000493601 HMGB1P09429 215 aaKnown RBP19.01■□□□□ 0.63
PTPRU-208ENST00000493601 ADCY7P51828 1080 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 EXOSC10Q01780 885 aaKnown RBP19.01■□□□□ 0.63
PTPRU-208ENST00000493601 TSGA10IPQ3SY00 556 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 RUFY4Q6ZNE9 571 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 SKAP1Q86WV1 359 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 TCEANC2Q96MN5 208 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 C17orf80Q9BSJ5 609 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 OSBPL7Q9BZF2 842 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 SLC9A2Q9UBY0 812 aa19.01■□□□□ 0.63
PTPRU-208ENST00000493601 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19■□□□□ 0.63
PTPRU-208ENST00000493601 MBLAC1A4D2B0 266 aaPredicted RBP19■□□□□ 0.63
PTPRU-208ENST00000493601 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 GOLGA8BA8MQT2 603 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 UPP2O95045 317 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 CHRNA1P02708 482 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 RCAN1P53805 252 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 NECAB3Q96P71 396 aaPredicted RBP19■□□□□ 0.63
PTPRU-208ENST00000493601 MXRA8Q9BRK3 442 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 SDF4Q9BRK5 362 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 GLT8D2Q9H1C3 349 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 AZI2Q9H6S1 392 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 KCNH7Q9NS40 1196 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 BRPF3Q9ULD4 1205 aa19■□□□□ 0.63
PTPRU-208ENST00000493601 NFASCO94856 1347 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms