RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 SETD4Q9NVD3 440 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 PCDHA4Q9UN74 947 aa10.75□□□□□ -0.69
SGIP1-213ENST00000493564 C17orf102A2RUQ5 167 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 IQCF3P0C7M6 154 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 NPY5RQ15761 445 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 Q7L0L9 218 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 OTOP2Q7RTS6 562 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 SESTD1Q86VW0 696 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 TEX2Q8IWB9 1127 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 NSUN7Q8NE18 718 aaKnown RBP10.74□□□□□ -0.69
SGIP1-213ENST00000493564 OXER1Q8TDS5 423 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 TBCKQ8TEA7 893 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 DHX38Q92620 1227 aaKnown RBP10.74□□□□□ -0.69
SGIP1-213ENST00000493564 GLG1Q92896 1179 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 ATP6V0A1Q93050 837 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 WNT8BQ93098 351 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 GJA10Q969M2 543 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 VWCEQ96DN2 955 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 IL23AQ9NPF7 189 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 SLC9A2Q9UBY0 812 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 LIMCH1Q9UPQ0 1083 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 GTF3C3Q9Y5Q9 886 aa10.74□□□□□ -0.69
SGIP1-213ENST00000493564 LAMA2P24043 3122 aaKnown RBP10.73□□□□□ -0.69
SGIP1-213ENST00000493564 IGLV3-22A0A075B6J6 115 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 M0R2N6 131 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 TREHO43280 583 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 FGBP02675 491 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 ACTR2P61160 394 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 ST3GAL1Q11201 340 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 BFSP2Q13515 415 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 INF2Q27J81 1249 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 MCTP2Q6DN12 878 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 CCDC83Q8IWF9 413 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 ZBTB10Q96DT7 871 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 PCYT2Q99447 389 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 ZNF577Q9BSK1 485 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 PHF20Q9BVI0 1012 aa10.73□□□□□ -0.69
SGIP1-213ENST00000493564 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
SGIP1-213ENST00000493564 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
SGIP1-213ENST00000493564 TRIP12Q14669 1992 aaPredicted RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 GRXCR1A8MXD5 290 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 IPO5O00410 1097 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 DHX15O43143 795 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 TDP2O95551 362 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 CCNE2O96020 404 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 CKBP12277 381 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 XBP1P17861 261 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 CIITAP33076 1130 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 THPOP40225 353 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 RBM25P49756 843 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 USP11P51784 963 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 IGBP1P78318 339 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 EARS2Q5JPH6 523 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 FAM109BQ6ICB4 259 aaPredicted RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 NIPA1Q7RTP0 329 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 TRMT1LQ7Z2T5 733 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 RPUSD2Q8IZ73 545 aaKnown RBP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 FAM161BQ96MY7 647 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 FTOQ9C0B1 505 aaKnown RBP eCLIP10.72□□□□□ -0.69
SGIP1-213ENST00000493564 SMARCAD1Q9H4L7 1026 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 AZI2Q9H6S1 392 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 NFASCO94856 1347 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 STK36Q9NRP7 1315 aa10.72□□□□□ -0.69
SGIP1-213ENST00000493564 FAM205CA6NFA0 338 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 BACH1O14867 736 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 MSH4O15457 936 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 SELPP16109 830 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 STAT5BP51692 787 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 NR5A1Q13285 461 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 PTK7Q13308 1070 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 GPNMBQ14956 572 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 NONOQ15233 471 aaKnown RBP eCLIP10.71□□□□□ -0.69
SGIP1-213ENST00000493564 TRIM71Q2Q1W2 868 aaKnown RBP10.71□□□□□ -0.69
SGIP1-213ENST00000493564 ZNF618Q5T7W0 954 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 GALNT17Q6IS24 598 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 SWSAP1Q6NVH7 229 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 PSRC1Q6PGN9 363 aaPredicted RBP10.71□□□□□ -0.69
SGIP1-213ENST00000493564 ABHD15Q6UXT9 468 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 PIK3AP1Q6ZUJ8 805 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 DAGLBQ8NCG7 672 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 WASF1Q92558 559 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 LENG9Q96B70 501 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 UPF2Q9HAU5 1272 aaKnown RBP10.71□□□□□ -0.69
SGIP1-213ENST00000493564 ERAP1Q9NZ08 941 aa10.71□□□□□ -0.69
SGIP1-213ENST00000493564 SCN5AQ14524 2016 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 CCDC194A0A1B0GVG4 234 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 CHMP2AO43633 222 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 LGR5O75473 907 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 ATG7O95352 703 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 SLC34A2O95436 690 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 CTSHP09668 335 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 GNAT1P11488 350 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 INSRRP14616 1297 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 PPFIA1Q13136 1202 aa10.7□□□□□ -0.7
SGIP1-213ENST00000493564 PLCB4Q15147 1175 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms