RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CLP1Q92989 425 aaKnown RBP20.44■□□□□ 0.86
NUP50-218ENST00000493456 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 BCAS3Q9H6U6 928 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 RIOX1Q9H6W3 641 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 RC3H2Q9HBD1 1191 aaKnown RBP20.44■□□□□ 0.86
NUP50-218ENST00000493456 NRCAMQ92823 1304 aa20.44■□□□□ 0.86
NUP50-218ENST00000493456 MBTPS2O43462 519 aa20.43■□□□□ 0.86
NUP50-218ENST00000493456 MRPS9P82933 396 aaKnown RBP20.43■□□□□ 0.86
NUP50-218ENST00000493456 HYAL1Q12794 435 aa20.43■□□□□ 0.86
NUP50-218ENST00000493456 SMAD4Q13485 552 aaKnown RBP20.43■□□□□ 0.86
NUP50-218ENST00000493456 HERC4Q5GLZ8 1057 aaPredicted RBP20.43■□□□□ 0.86
NUP50-218ENST00000493456 TAF2Q6P1X5 1199 aa20.43■□□□□ 0.86
NUP50-218ENST00000493456 ZFP91Q96JP5 570 aaPredicted RBP20.43■□□□□ 0.86
NUP50-218ENST00000493456 PIGSQ96S52 555 aa20.43■□□□□ 0.86
NUP50-218ENST00000493456 ATG2AQ2TAZ0 1938 aa20.43■□□□□ 0.86
NUP50-218ENST00000493456 GRM4Q14833 912 aa20.42■□□□□ 0.86
NUP50-218ENST00000493456 TRIM50Q86XT4 487 aa20.42■□□□□ 0.86
NUP50-218ENST00000493456 SENP7Q9BQF6 1050 aa20.42■□□□□ 0.86
NUP50-218ENST00000493456 PLVAPQ9BX97 442 aa20.42■□□□□ 0.86
NUP50-218ENST00000493456 EHMT1Q9H9B1 1298 aa20.42■□□□□ 0.86
NUP50-218ENST00000493456 ZNF318Q5VUA4 2279 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 PNMA6FA0A0J9YX94 578 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 GRM6O15303 877 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 CHRNA1P02708 482 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 MMP1P03956 469 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 GHRP10912 638 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 SEMA3FQ13275 785 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 RSPH3Q86UC2 560 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 PPP2R3CQ969Q6 453 aa20.41■□□□□ 0.86
NUP50-218ENST00000493456 DLX2Q07687 328 aaPredicted RBP20.4■□□□□ 0.86
NUP50-218ENST00000493456 BTG3Q14201 252 aaPredicted RBP20.4■□□□□ 0.86
NUP50-218ENST00000493456 CLUL1Q15846 466 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 SLC35G1Q2M3R5 365 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 UTP14CQ5TAP6 766 aaKnown RBP20.4■□□□□ 0.86
NUP50-218ENST00000493456 XRRA1Q6P2D8 792 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 CYB5R4Q7L1T6 521 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 PLEKHM2Q8IWE5 1019 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 SMC5Q8IY18 1101 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 GIMAP8Q8ND71 665 aaPredicted RBP20.4■□□□□ 0.86
NUP50-218ENST00000493456 ZNF689Q96CS4 500 aaPredicted RBP20.4■□□□□ 0.86
NUP50-218ENST00000493456 MUTYHQ9UIF7 546 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 CD207Q9UJ71 328 aa20.4■□□□□ 0.86
NUP50-218ENST00000493456 CYTH3O43739 400 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 TBX10O75333 385 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 MGAT3Q09327 533 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 TRDNQ13061 729 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 CHD1LQ86WJ1 897 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 RNF135Q8IUD6 432 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 RTEL1Q9NZ71 1219 aa20.39■□□□□ 0.85
NUP50-218ENST00000493456 MYO7AQ13402 2215 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 STXBP3O00186 592 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 ENPP3O14638 875 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 RPLP2P05387 115 aaKnown RBP20.38■□□□□ 0.85
NUP50-218ENST00000493456 AAMPQ13685 434 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 LPIN1Q14693 890 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 NAALADL2Q58DX5 795 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 PCNX4Q63HM2 1172 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 RUFY4Q6ZNE9 571 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 P2RX5Q93086 422 aa20.38■□□□□ 0.85
NUP50-218ENST00000493456 DOCK5Q9H7D0 1870 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 ERICH2A1L162 156 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 DGKIO75912 1065 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 SP4Q02446 784 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 TSHZ1Q6ZSZ6 1077 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 NLRX1Q86UT6 975 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 EDAQ92838 391 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 CUL5Q93034 780 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 IGFLR1Q9H665 355 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 TUBE1Q9UJT0 475 aa20.37■□□□□ 0.85
NUP50-218ENST00000493456 EYA4O95677 639 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 GTF2F1P35269 517 aaKnown RBP eCLIP20.36■□□□□ 0.852e-6■■■■□ 26
NUP50-218ENST00000493456 TCF7P36402 384 aaPredicted RBP20.36■□□□□ 0.85
NUP50-218ENST00000493456 NDUFV1P49821 464 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 TROAPQ12815 778 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 ADAM15Q13444 863 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 SART3Q15020 963 aaKnown RBP20.36■□□□□ 0.85
NUP50-218ENST00000493456 PKN1Q16512 942 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 FBXO47Q5MNV8 452 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 BMP8AQ7Z5Y6 402 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 SMARCC2Q8TAQ2 1214 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 CDHR1Q96JP9 859 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 MSLNLQ96KJ4 702 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 RWDD1Q9H446 243 aaPredicted RBP20.36■□□□□ 0.85
NUP50-218ENST00000493456 ERAP1Q9NZ08 941 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 PLAGL2Q9UPG8 496 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
NUP50-218ENST00000493456 TTC3P53804 2025 aa20.36■□□□□ 0.85
NUP50-218ENST00000493456 MBLAC1A4D2B0 266 aaPredicted RBP20.35■□□□□ 0.85
NUP50-218ENST00000493456 PIK3CDO00329 1044 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 IFIT3O14879 490 aaKnown RBP20.35■□□□□ 0.85
NUP50-218ENST00000493456 NUCB1Q02818 461 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 GRIK4Q16099 956 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 CMTR2Q8IYT2 770 aaKnown RBP20.35■□□□□ 0.85
NUP50-218ENST00000493456 PRRX2Q99811 253 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 FTHL17Q9BXU8 183 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 ALG13Q9NP73 1137 aaKnown RBP20.35■□□□□ 0.85
NUP50-218ENST00000493456 TELO2Q9Y4R8 837 aa20.35■□□□□ 0.85
NUP50-218ENST00000493456 KAT6AQ92794 2004 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms