RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 DNAAF3Q8N9W5 541 aa17.63■□□□□ 0.41
BRAT1-206ENST00000493232 RPF1Q9H9Y2 349 aaKnown RBP17.63■□□□□ 0.41
BRAT1-206ENST00000493232 PIH1D3Q9NQM4 214 aaKnown RBP17.63■□□□□ 0.41
BRAT1-206ENST00000493232 PRAMEF22A3QJZ6 481 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 PRPSAP2O60256 369 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 BAG2O95816 211 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 ASNSP08243 561 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 TCP11Q8WWU5 503 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 H7C1W4 665 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 MGEA5O60502 916 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 ANXA13P27216 316 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 SLMAPQ14BN4 828 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 IQCB1Q15051 598 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 OR6B2Q6IFH4 312 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 C11orf57Q6ZUT1 292 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-206ENST00000493232 PIGBQ92521 554 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 SMYD2Q9NRG4 433 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 F8W8V4 182 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 LDHAP00338 332 aaKnown RBP17.62■□□□□ 0.41
BRAT1-206ENST00000493232 TTLL11Q8NHH1 800 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 MID2Q9UJV3 735 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 COBLO75128 1261 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 THOC5Q13769 683 aaKnown RBP17.62■□□□□ 0.41
BRAT1-206ENST00000493232 DARS2Q6PI48 645 aaKnown RBP17.62■□□□□ 0.41
BRAT1-206ENST00000493232 KCTD6Q8NC69 237 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 CCDC197Q8NCU1 140 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 PAGE5Q96GU1 130 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 ENC1O14682 589 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 UBE2SQ16763 222 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 RYBPQ8N488 228 aaPredicted RBP17.62■□□□□ 0.41
BRAT1-206ENST00000493232 TTLL6Q8N841 843 aa17.62■□□□□ 0.41
BRAT1-206ENST00000493232 MYO3BQ8WXR4 1341 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 COG7P83436 770 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 ATP6V1E2Q96A05 226 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 EPB41L5Q9HCM4 733 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 RESTQ13127 1097 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 SUSD4Q5VX71 490 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 ZBTB33Q86T24 672 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 C7orf31Q8N865 590 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 TACO1Q9BSH4 297 aaKnown RBP17.61■□□□□ 0.41
BRAT1-206ENST00000493232 TLK1Q9UKI8 766 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 TSTA3Q13630 321 aaPredicted RBP17.61■□□□□ 0.41
BRAT1-206ENST00000493232 PDE11AQ9HCR9 933 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 CFAP65Q6ZU64 1925 aaKnown RBP17.61■□□□□ 0.41
BRAT1-206ENST00000493232 Q3C1V9 767 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 ELMSAN1Q6PJG2 1045 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 VSTM4Q8IW00 320 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 GRAMD1CQ8IYS0 662 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 FAM167AQ96KS9 214 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 NDST4Q9H3R1 872 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 SCINQ9Y6U3 715 aa17.61■□□□□ 0.41
BRAT1-206ENST00000493232 DDIT3P35638 169 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 EIF4A3P38919 411 aaKnown RBP17.6■□□□□ 0.41
BRAT1-206ENST00000493232 PLTPP55058 493 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 BZW1Q7L1Q6 419 aaKnown RBP17.6■□□□□ 0.41
BRAT1-206ENST00000493232 MCUQ8NE86 351 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 PANX2Q96RD6 677 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 MSTO1Q9BUK6 570 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 FBXO40Q9UH90 709 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 PYCARDQ9ULZ3 195 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 TTI1O43156 1089 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 RPS6KA4O75676 772 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 RNF139Q8WU17 664 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 CALN1Q9BXU9 219 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 NHEJ1Q9H9Q4 299 aaPredicted RBP17.6■□□□□ 0.41
BRAT1-206ENST00000493232 PCDHB6Q9Y5E3 794 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 K7ERI5 159 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 STAG1Q8WVM7 1258 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 KIF9Q9HAQ2 790 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
BRAT1-206ENST00000493232 ADGRL3Q9HAR2 1447 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 HSPA8P11142 646 aaKnown RBP17.6■□□□□ 0.41
BRAT1-206ENST00000493232 RNF207Q6ZRF8 634 aa17.6■□□□□ 0.41
BRAT1-206ENST00000493232 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 EIF2AK2P19525 551 aaKnown RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 SNX1Q13596 522 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 GIMAP8Q8ND71 665 aaPredicted RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 SERPINB6P35237 376 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 BASP1P80723 227 aaKnown RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 STRBPQ96SI9 672 aaKnown RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 LCMT1Q9UIC8 334 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 SLC8A2Q9UPR5 921 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 ARAP3Q8WWN8 1544 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 MBD5Q9P267 1494 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 LRRD1A4D1F6 860 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 STMN1P16949 149 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 RHOT2Q8IXI1 618 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 CNOT10Q9H9A5 744 aaKnown RBP17.59■□□□□ 0.41
BRAT1-206ENST00000493232 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 SASH1O94885 1247 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 MT-ND3P03897 115 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 NUDCD1Q96RS6 583 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 MXD3Q9BW11 206 aa17.59■□□□□ 0.41
BRAT1-206ENST00000493232 NECTIN1Q15223 517 aa17.58■□□□□ 0.41
BRAT1-206ENST00000493232 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms