RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 TCF7P36402 384 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 SREBF1P36956 1147 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RABGGTBP53611 331 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 ADAM17P78536 824 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 NTRK3Q16288 839 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 CEP55Q53EZ4 464 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 UTP14CQ5TAP6 766 aaKnown RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 NIPA1Q7RTP0 329 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 WNT8BQ93098 351 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 ANO3Q9BYT9 981 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 ZMYND12Q9H0C1 365 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 KCNH7Q9NS40 1196 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 SETD4Q9NVD3 440 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 NFASCO94856 1347 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 TREHO43280 583 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 IFNAR1P17181 557 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 THPOP40225 353 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 KCNJ6P48051 423 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 AKAP17AQ02040 695 aaKnown RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 IKBKEQ14164 716 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 PKN1Q16512 942 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RPAINQ86UA6 219 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 HERC6Q8IVU3 1022 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 GAS2L1Q99501 681 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
LRTM1-202ENST00000493075 SMARCAD1Q9H4L7 1026 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 C6orf50Q9HD87 102 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 CYP46A1Q9Y6A2 500 aa13.13□□□□□ -0.31
LRTM1-202ENST00000493075 LGR5O75473 907 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 CYP3A4P08684 503 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 MYOGP15173 224 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 GNA11P29992 359 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 WDR5P61964 334 aaKnown RBP13.12□□□□□ -0.31
LRTM1-202ENST00000493075 SP4Q02446 784 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 FAM26DQ5JW98 314 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 TRIM50Q86XT4 487 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRTM1-202ENST00000493075 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 CRYGNQ8WXF5 182 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
LRTM1-202ENST00000493075 ZNF274Q96GC6 653 aaPredicted RBP13.12□□□□□ -0.31
LRTM1-202ENST00000493075 SDF4Q9BRK5 362 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 JPH1Q9HDC5 661 aaPredicted RBP13.12□□□□□ -0.31
LRTM1-202ENST00000493075 SLC9A2Q9UBY0 812 aa13.12□□□□□ -0.31
LRTM1-202ENST00000493075 ATG7O95352 703 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 ARP10275 920 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 ZNF76P36508 570 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 ARHGAP4P98171 946 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 PLEKHG4Q58EX7 1191 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 POTEHQ6S545 545 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 BICD2Q8TD16 824 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 GLG1Q92896 1179 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 PGBD1Q96JS3 809 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 AGO4Q9HCK5 861 aaKnown RBP13.11□□□□□ -0.31
LRTM1-202ENST00000493075 SH3GLB2Q9NR46 395 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 TMEM260Q9NX78 707 aa13.11□□□□□ -0.31
LRTM1-202ENST00000493075 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 DLL1O00548 723 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 RPLP2P05387 115 aaKnown RBP13.1□□□□□ -0.31
LRTM1-202ENST00000493075 CA3P07451 260 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 ACTR2P61160 394 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 TOB2Q14106 344 aaPredicted RBP13.1□□□□□ -0.31
LRTM1-202ENST00000493075 ADGRE1Q14246 886 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 TCTN1Q2MV58 587 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 JAKMIP3Q5VZ66 844 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 CCDC148Q8NFR7 591 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 DBF4BQ8NFT6 615 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 PHKBQ93100 1093 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 PCYT2Q99447 389 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 AZI2Q9H6S1 392 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 PKD2L1Q9P0L9 805 aa13.1□□□□□ -0.31
LRTM1-202ENST00000493075 MBLAC1A4D2B0 266 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 TLL1O43897 1013 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 GJB5O95377 273 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 POU3F3P20264 500 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 SLC26A2P50443 739 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 TAP1Q03518 808 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 PPFIA1Q13136 1202 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 ITGB3BPQ13352 177 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 MKRN4PQ13434 485 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 GRIK4Q16099 956 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 RSPH3Q86UC2 560 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 FAM177A1Q8N128 213 aaPredicted RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 REXO1Q8N1G1 1221 aaKnown RBP13.09□□□□□ -0.31
LRTM1-202ENST00000493075 SEPT8Q92599 483 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 APBB2Q92870 758 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 RAD9AQ99638 391 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
LRTM1-202ENST00000493075 IGLV3-22A0A075B6J6 115 aa13.08□□□□□ -0.32
LRTM1-202ENST00000493075 IGKV6D-21A0A0A0MT36 114 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms