RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 JAK2O60674 1132 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 HOXC8P31273 242 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 MCM2P49736 904 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 TRIM29Q14134 588 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 PRR16Q569H4 304 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 UTP14CQ5TAP6 766 aaKnown RBP12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 GDF6Q6KF10 455 aaPredicted RBP12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 CCDC83Q8IWF9 413 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 CAGE1Q8TC20 777 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 LENG9Q96B70 501 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 ZNF577Q9BSK1 485 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 BACH2Q9BYV9 841 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 TCEAL9Q9UHQ7 104 aa12.1□□□□□ -0.47
CDC42SE1-206ENST00000492796 CYP3A7-CYP3A51PA0A087WV96 503 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 LGR5O75473 907 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 MMP1P03956 469 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 SMIM10L2AP0DMW4 78 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 SMIM10L2BP0DMW5 78 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 CYP2C9P11712 490 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 CYP3A7P24462 503 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 CYP2C18P33260 490 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 KRT2P35908 639 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 ACTR2P61160 394 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 RBL2Q08999 1139 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 BFSP2Q13515 415 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 Q4G0T1 1027 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 PSRC1Q6PGN9 363 aaPredicted RBP12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 TRIM50Q86XT4 487 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 PPP1R13LQ8WUF5 828 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 NAP1L4Q99733 375 aaKnown RBP12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 AZI2Q9H6S1 392 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 TELO2Q9Y4R8 837 aa12.09□□□□□ -0.47
CDC42SE1-206ENST00000492796 DHX15O43143 795 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 EDIL3O43854 480 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 ATG7O95352 703 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 PFKMP08237 780 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 GNAT1P11488 350 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 CSF2RAP15509 400 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 RFC2P35250 354 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 SLC26A2P50443 739 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 KRT76Q01546 638 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 PTK7Q13308 1070 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 NEK8Q86SG6 692 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 RETREG2Q8NC44 543 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 AFAP1L1Q8TED9 768 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 GLG1Q92896 1179 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 TNPO1Q92973 898 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 MBOAT7Q96N66 472 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 CTAGE1Q96RT6 745 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 WNT8AQ9H1J5 351 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 GJB4Q9NTQ9 266 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 UMODL1Q5DID0 1318 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 NRCAMQ92823 1304 aa12.08□□□□□ -0.48
CDC42SE1-206ENST00000492796 IGKV6D-21A0A0A0MT36 114 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 DDX39AO00148 427 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 MSH4O15457 936 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 DTNBO60941 627 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 CCNE2O96020 404 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 GCFC2P16383 781 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 FXR1P51114 621 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 CCL23P55773 120 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 INF2Q27J81 1249 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 KRT40Q6A162 431 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 PPP4R3AQ6IN85 833 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 MIS18BP1Q6P0N0 1132 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 PIK3AP1Q6ZUJ8 805 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 PLPPR4Q7Z2D5 763 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 RPUSD2Q8IZ73 545 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 OXER1Q8TDS5 423 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 TNFRSF25Q93038 417 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 ATP6V0A1Q93050 837 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 RIT2Q99578 217 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 RNPEPQ9H4A4 650 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 IL23AQ9NPF7 189 aa12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 DDX25Q9UHL0 483 aaKnown RBP12.07□□□□□ -0.48
CDC42SE1-206ENST00000492796 CAND2O75155 1236 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 TDP2O95551 362 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 IQCF3P0C7M6 154 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 SELPP16109 830 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 STAT5BP51692 787 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 EPHB4P54760 987 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 PPFIA1Q13136 1202 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 NR5A1Q13285 461 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 HIC1Q14526 733 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 SHHQ15465 462 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 C9orf50Q5SZB4 431 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 FAM160B1Q5W0V3 765 aa12.06□□□□□ -0.48
CDC42SE1-206ENST00000492796 SERINC5Q86VE9 423 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms