RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 PLAGL2Q9UPG8 496 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PPEF1O14829 653 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TOM1O60784 492 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FAM153BP0C7A2 387 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 XRCC5P13010 732 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FAM153CQ494X1 144 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 RETREG2Q8NC44 543 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FAM153AQ9UHL3 310 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GPR75-ASB3A0A0A6YYF3 556 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 EBAG9O00559 213 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MED24O75448 989 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TCP1P17987 556 aaKnown RBP16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CCDC25Q86WR0 208 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CAPS2Q9BXY5 557 aa16.69■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TRIM49P0CI25 452 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TRIM49CP0CI26 452 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 RHBDL3P58872 404 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ZNF543Q08ER8 600 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 EXOC3L4Q17RC7 722 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PDXDC1Q6P996 788 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 LRRC31Q6UY01 552 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PEX26Q7Z412 305 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GUF1Q8N442 669 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TSEN2Q8NCE0 465 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 COL4A1P02462 1669 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GH2P01242 217 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 NMT1P30419 496 aaKnown RBP16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CENPPQ6IPU0 288 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MED4Q9NPJ6 270 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 STIM2Q9P246 746 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 STK17AQ9UEE5 414 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FEZ2Q9UHY8 353 aaPredicted RBP16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ZBTB5O15062 677 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 KIAA0754O94854 1291 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GLI1P08151 1106 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PRPHP41219 470 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GUCY1A3Q02108 690 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 NUP98P52948 1817 aa16.68■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ZNF142P52746 1687 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SSR1P43307 286 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CDC42EP5Q6NZY7 148 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CREG2Q8IUH2 290 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FAM184BQ9ULE4 1060 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ZNF746Q6NUN9 644 aaPredicted RBP16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ERMNQ8TAM6 284 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MYH7P12883 1935 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MYH6P13533 1939 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SYF2O95926 243 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GJC1P36383 396 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 NNTQ13423 1086 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 LRRC27Q9C0I9 530 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MKRN1Q9UHC7 482 aaKnown RBP16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
TNFRSF1B-203ENST00000492361 KRIT1O00522 736 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ARHGAP4P98171 946 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PAPD7Q5XG87 772 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ALKBH5Q6P6C2 394 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CERS5Q8N5B7 392 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TBC1D22AQ8WUA7 517 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 HNRNPLLQ8WVV9 542 aaKnown RBP16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 HAS1Q92839 578 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 ERGIC2Q96RQ1 377 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 C4AP0C0L4 1744 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 C4BP0C0L5 1744 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SPEF2Q9C093 1822 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PTK2Q05397 1052 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 KCNMA1Q12791 1236 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 VPS36Q86VN1 386 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 FBXO11Q86XK2 927 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 OPA1O60313 960 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SEC24CP53992 1094 aa16.66■□□□□ 0.26
TNFRSF1B-203ENST00000492361 F5H6K3 240 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 MYL1P05976 194 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PPP4CP60510 307 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 LRRC63Q05C16 580 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 KLRC3Q07444 240 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SEPT12Q8IYM1 358 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CEP89Q96ST8 783 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 REEP2Q9BRK0 252 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 TLR10Q9BXR5 811 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CELF4Q9BZC1 486 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SIK3Q9Y2K2 1263 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 SRLQ86TD4 932 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 AMACRQ9UHK6 382 aa16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PARP4Q9UKK3 1724 aaKnown RBP16.65■□□□□ 0.26
TNFRSF1B-203ENST00000492361 E7EVH7 732 aa16.64■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.26
TNFRSF1B-203ENST00000492361 GLYCTKQ8IVS8 523 aa16.64■□□□□ 0.26
TNFRSF1B-203ENST00000492361 NT5C3AQ9H0P0 336 aa16.64■□□□□ 0.26
TNFRSF1B-203ENST00000492361 CTDP1Q9Y5B0 961 aaPredicted RBP16.64■□□□□ 0.26
TNFRSF1B-203ENST00000492361 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
TNFRSF1B-203ENST00000492361 M0R2N6 131 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms