RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
TOM1-215ENST00000491987 SLC9A7Q96T83 725 aa17.13■□□□□ 0.33
TOM1-215ENST00000491987 SLC26A6Q9BXS9 759 aa17.13■□□□□ 0.33
TOM1-215ENST00000491987 UPF3BQ9BZI7 483 aaKnown RBP17.13■□□□□ 0.33
TOM1-215ENST00000491987 SLC28A3Q9HAS3 691 aa17.13■□□□□ 0.33
TOM1-215ENST00000491987 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
TOM1-215ENST00000491987 PCDHA11Q9Y5I1 949 aa17.13■□□□□ 0.33
TOM1-215ENST00000491987 TRIP12Q14669 1992 aaPredicted RBP17.13■□□□□ 0.33
TOM1-215ENST00000491987 ESYT2A0FGR8 921 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 BAIAP3O94812 1187 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 CXCL10P02778 98 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 ARP10275 920 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 EVCP57679 992 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 ARHGAP4P98171 946 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 MBTPS1Q14703 1052 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 TCTN1Q2MV58 587 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 CEP55Q53EZ4 464 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 CNKSR3Q6P9H4 555 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
TOM1-215ENST00000491987 LMBR1Q8WVP7 490 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 SEPT1Q8WYJ6 367 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 LARP6Q9BRS8 491 aaKnown RBP17.12■□□□□ 0.33
TOM1-215ENST00000491987 RNF26Q9BY78 433 aaPredicted RBP17.12■□□□□ 0.33
TOM1-215ENST00000491987 TM6SF1Q9BZW5 370 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 PRDM12Q9H4Q4 367 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 C6orf50Q9HD87 102 aa17.12■□□□□ 0.33
TOM1-215ENST00000491987 JPH1Q9HDC5 661 aaPredicted RBP17.12■□□□□ 0.33
TOM1-215ENST00000491987 CENPBP07199 599 aaPredicted RBP17.11■□□□□ 0.33
TOM1-215ENST00000491987 GNAT1P11488 350 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 IFNAR1P17181 557 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 MARK3P27448 753 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 ZNF76P36508 570 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 KCNJ6P48051 423 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 WDR5P61964 334 aaKnown RBP17.11■□□□□ 0.33
TOM1-215ENST00000491987 PPP2R2DQ66LE6 453 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 REXO1Q8N1G1 1221 aaKnown RBP17.11■□□□□ 0.33
TOM1-215ENST00000491987 GLG1Q92896 1179 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 AGO4Q9HCK5 861 aaKnown RBP17.11■□□□□ 0.33
TOM1-215ENST00000491987 SLC9A2Q9UBY0 812 aa17.11■□□□□ 0.33
TOM1-215ENST00000491987 RSPH10B2B2RC85 870 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 CTSHP09668 335 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 RSPH10BP0C881 870 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 ITGB3BPQ13352 177 aaPredicted RBP17.1■□□□□ 0.33
TOM1-215ENST00000491987 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 TET1Q8NFU7 2136 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 PDRG1Q9NUG6 133 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 ERAP1Q9NZ08 941 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 VPS54Q9P1Q0 977 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 NFASCO94856 1347 aa17.1■□□□□ 0.33
TOM1-215ENST00000491987 DDX39AO00148 427 aaKnown RBP17.09■□□□□ 0.33
TOM1-215ENST00000491987 MEIS1O00470 390 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 CA3P07451 260 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 GNA11P29992 359 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 ACTR2P61160 394 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 ADAM17P78536 824 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 DEFB103AP81534 67 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 STK3Q13188 491 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 TMCO2Q7Z6W1 182 aaPredicted RBP17.09■□□□□ 0.33
TOM1-215ENST00000491987 CCDC148Q8NFR7 591 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 RASGRP4Q8TDF6 673 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 PCYT2Q99447 389 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 GAS2L1Q99501 681 aaPredicted RBP17.09■□□□□ 0.33
TOM1-215ENST00000491987 SMARCAD1Q9H4L7 1026 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 EMSYQ7Z589 1322 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
TOM1-215ENST00000491987 FAM86B1E9PN63 330 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 LGR5O75473 907 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 FAM86B2P0C5J1 330 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 GRIK4Q16099 956 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 NIPA1Q7RTP0 329 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 PLA2G4DQ86XP0 818 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 ZNF274Q96GC6 653 aaPredicted RBP17.08■□□□□ 0.32
TOM1-215ENST00000491987 UIMC1Q96RL1 719 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 PTPRSQ13332 1948 aa17.08■□□□□ 0.32
TOM1-215ENST00000491987 IGLV3-22A0A075B6J6 115 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 ABHD14A-ACY1A0A1B0GW23 586 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 CPLX1O14810 134 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 CAND2O75155 1236 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 CYP3A4P08684 503 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 IGBP1P78318 339 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
TOM1-215ENST00000491987 IKBKEQ14164 716 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 ADGRE1Q14246 886 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 RUFY4Q6ZNE9 571 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.07■□□□□ 0.32
TOM1-215ENST00000491987 DBF4BQ8NFT6 615 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 BICD2Q8TD16 824 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 OSBPL7Q9BZF2 842 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 AZI2Q9H6S1 392 aa17.07■□□□□ 0.32
TOM1-215ENST00000491987 TLL1O43897 1013 aa17.06■□□□□ 0.32
TOM1-215ENST00000491987 ARHGEF15O94989 841 aa17.06■□□□□ 0.32
TOM1-215ENST00000491987 CCNE2O96020 404 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms