RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 TLL1O43897 1013 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 ST18O60284 1047 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 LPXNO60711 386 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 TGFB3P10600 412 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 THPOP40225 353 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 KCNJ6P48051 423 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 SP4Q02446 784 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 RABEP1Q15276 862 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 UBE2SQ16763 222 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 AAK1Q2M2I8 961 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 METTL7BQ6UX53 244 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 CYFIP1Q7L576 1253 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 SMARCC2Q8TAQ2 1214 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 RRP36Q96EU6 259 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 ZNF274Q96GC6 653 aaPredicted RBP12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 HCN4Q9Y3Q4 1203 aa12.64□□□□□ -0.39
TMEM39A-211ENST00000491685 RALGAPA2Q2PPJ7 1873 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 C17orf102A2RUQ5 167 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 H3BRB1 525 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 FIBPO43427 364 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 CPA1P15085 419 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 MCM2P49736 904 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 AKAP17AQ02040 695 aaKnown RBP12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 GRB10Q13322 594 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 GNPTABQ3T906 1256 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 GDPD5Q8WTR4 605 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 ATP6V0A1Q93050 837 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 NECAB3Q96P71 396 aaPredicted RBP12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 AGXT2Q9BYV1 514 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 SLKQ9H2G2 1235 aaPredicted RBP12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 TUT1Q9H6E5 874 aaKnown RBP12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 MTUS1Q9ULD2 1270 aa12.63□□□□□ -0.39
TMEM39A-211ENST00000491685 KIAA1671Q9BY89 1806 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 NOP56O00567 594 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 ATP9AO75110 1047 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 LGR5O75473 907 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 GJB5O95377 273 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 PARNO95453 639 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 CTSHP09668 335 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 POU3F3P20264 500 aaPredicted RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 METAP2P50579 478 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 KCNQ1P51787 676 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 APOBRQ0VD83 1088 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 UTP14CQ5TAP6 766 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 APOA5Q6Q788 366 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 TMTC3Q6ZXV5 915 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 MICU3Q86XE3 530 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 DBF4BQ8NFT6 615 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 ZSCAN31Q96LW9 406 aaPredicted RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 RNPEPQ9H4A4 650 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 PKD2L1Q9P0L9 805 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 SEC63Q9UGP8 760 aaKnown RBP12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 CNTNAP5Q8WYK1 1306 aa12.62□□□□□ -0.39
TMEM39A-211ENST00000491685 ABHD14A-ACY1A0A1B0GW23 586 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 LINC01553A4QN01 128 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 KIF28PB7ZC32 967 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 CPLX1O14810 134 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 STAM2O75886 525 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 KCNA2P16389 499 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 ITGB5P18084 799 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 EVCP57679 992 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 NEDD9Q14511 834 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 RTN1Q16799 776 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 TYW1BQ6NUM6 668 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 CUL5Q93034 780 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 TBC1D32Q96NH3 1257 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 LRFN3Q9BTN0 628 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 ZBED2Q9BTP6 218 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 SETD4Q9NVD3 440 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 LIMCH1Q9UPQ0 1083 aa12.61□□□□□ -0.39
TMEM39A-211ENST00000491685 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 CDKL5O76039 1030 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 PDIA3P30101 505 aaKnown RBP12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 ADAM17P78536 824 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 IKBKEQ14164 716 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 PLEKHG4Q58EX7 1191 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 WWC2Q6AWC2 1192 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 RUFY4Q6ZNE9 571 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 PGBD1Q96JS3 809 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 SUGCTQ9HAC7 445 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 BRPF3Q9ULD4 1205 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 BRWD1Q9NSI6 2320 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 EMSYQ7Z589 1322 aa12.6□□□□□ -0.39
TMEM39A-211ENST00000491685 WDR81Q562E7 1941 aa12.59□□□□□ -0.39
TMEM39A-211ENST00000491685 GSTTP1A0A1W2PQM5 241 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms