RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 RBL2Q08999 1139 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 TMEM62Q0P6H9 643 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 MKRN4PQ13434 485 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 SKIV2LQ15477 1246 aaKnown RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 METTL7BQ6UX53 244 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 CENPQQ7L2Z9 268 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 MAP3K14Q99558 947 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 KATNAL1Q9BW62 490 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 FOXD4L1Q9NU39 408 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 MAP3K20Q9NYL2 800 aaKnown RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 UBIAD1Q9Y5Z9 338 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 V9GY48 417 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-211ENST00000491581 WDR81Q562E7 1941 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 KAT6AQ92794 2004 aa10.24□□□□□ -0.77
HDAC3-211ENST00000491581 PRRC2BQ5JSZ5 2229 aaKnown RBP10.23□□□□□ -0.77
HDAC3-211ENST00000491581 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-211ENST00000491581 LINC01553A4QN01 128 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 RSPH10B2B2RC85 870 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 PIK3CDO00329 1044 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 CHRNA1P02708 482 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 RSPH10BP0C881 870 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 ADAM17P78536 824 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 ITGB3BPQ13352 177 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-211ENST00000491581 MARCH8Q5T0T0 291 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 SGMS1Q86VZ5 419 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 MYOCDQ8IZQ8 938 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 RASGRP4Q8TDF6 673 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 CUL5Q93034 780 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 MAF1Q9H063 256 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 THEGQ9P2T0 379 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 SNX14Q9Y5W7 946 aa10.23□□□□□ -0.77
HDAC3-211ENST00000491581 GOLGA8AA7E2F4 631 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 GOLGA8BA8MQT2 603 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 ZBTB43O43298 467 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 CDC45O75419 566 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 GJB5O95377 273 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 TGFB3P10600 412 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 GHRP10912 638 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 IBSPP21815 317 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 NAPAP54920 295 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 MTMR1Q13613 665 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 NEDD9Q14511 834 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 RTN1Q16799 776 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 GNPTABQ3T906 1256 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 PLEKHG4Q58EX7 1191 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 TJAP1Q5JTD0 557 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 JAKMIP3Q5VZ66 844 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 KCNV1Q6PIU1 500 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 Q6ZUG5 572 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 DHX32Q7L7V1 743 aaKnown RBP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 TRMT1LQ7Z2T5 733 aaKnown RBP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 CCDC155Q8N6L0 562 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 ADAMTS19Q8TE59 1207 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 DNAJB3Q8WWF6 145 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 KHSRPQ92945 711 aaKnown RBP eCLIP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 PHKBQ93100 1093 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 GJA10Q969M2 543 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 JAKMIP1Q96N16 626 aaKnown RBP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 ASB2Q96Q27 587 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 PPP1R16BQ96T49 567 aa10.22□□□□□ -0.77
HDAC3-211ENST00000491581 NCOA5Q9HCD5 579 aaKnown RBP10.22□□□□□ -0.77
HDAC3-211ENST00000491581 SMCO2A6NFE2 343 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 C19orf67A6NJJ6 358 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 EDIL3O43854 480 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 BAIAP3O94812 1187 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 CCNE2O96020 404 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 IKBKEQ14164 716 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 SAMD3Q8N6K7 520 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 PHOSPHO2Q8TCD6 241 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 LINC01599Q8WXQ3 324 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 BRF1Q92994 677 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 LZTS2Q9BRK4 669 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 FAM49AQ9H0Q0 323 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-211ENST00000491581 JADE2Q9NQC1 790 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 KCNH7Q9NS40 1196 aa10.21□□□□□ -0.77
HDAC3-211ENST00000491581 TRANK1O15050 2925 aa10.21□□□□□ -0.78
HDAC3-211ENST00000491581 MUC3AQ02505 3323 aa10.21□□□□□ -0.78
HDAC3-211ENST00000491581 EVPLQ92817 2033 aa10.21□□□□□ -0.78
HDAC3-211ENST00000491581 ABHD14A-ACY1A0A1B0GW23 586 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 SPDYE3A6NKU9 549 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 FAM86B1E9PN63 330 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 FAM86B2P0C5J1 330 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CALM1P0DP23 149 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CALM2P0DP24 149 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CALM3P0DP25 149 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 BMP1P13497 986 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CLK2P49760 499 aaKnown RBP10.2□□□□□ -0.78
HDAC3-211ENST00000491581 GNAQP50148 359 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 GATMP50440 423 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 CCT2P78371 535 aaKnown RBP10.2□□□□□ -0.78
HDAC3-211ENST00000491581 MGAT3Q09327 533 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 PPFIA1Q13136 1202 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 LPIN1Q14693 890 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 GRIK4Q16099 956 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 PKN1Q16512 942 aa10.2□□□□□ -0.78
HDAC3-211ENST00000491581 NLRX1Q86UT6 975 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms