RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 FAM126BQ8IXS8 530 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 KBTBD2Q8IY47 623 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 IFNL3Q8IZI9 196 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 LRRC47Q8N1G4 583 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 NGEFQ8N5V2 710 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 NPLOC4Q8TAT6 608 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PIP4K2CQ8TBX8 421 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 C8orf49Q96NF6 230 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 AARSD1Q9BTE6 412 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PHF20Q9BVI0 1012 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 LNPKQ9C0E8 428 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 EPN3Q9H201 632 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 C12orf65Q9H3J6 166 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 TMPRSS5Q9H3S3 457 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 SMOC1Q9H4F8 434 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 DTLQ9NZJ0 730 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ARHGAP28Q9P2N2 729 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PFDN2Q9UHV9 154 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 ST6GALNAC2Q9UJ37 374 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PTPRKQ15262 1439 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 SPATA31E1Q6ZUB1 1445 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 PDS5BQ9NTI5 1447 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 SUPT6HQ7KZ85 1726 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 GAPVD1Q14C86 1478 aa2.64□□□□□ -1.99
SNRNP40-207ENST00000491106 CFAP43Q8NDM7 1665 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 CTTNBP2Q8WZ74 1663 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 POLR1AO95602 1720 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 DNMBPQ6XZF7 1577 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 NCOA1Q15788 1441 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 AKNAQ7Z591 1439 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 SMG6Q86US8 1419 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TRAV20A0A0B4J274 112 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 A0A1W2PQU0 124 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 KRTAP9-7A8MTY7 169 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 FAM47E-STBD1D6RA91 191 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 LAMTOR5O43504 91 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 ENO2P09104 434 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 FBLN1P23142 703 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 GTF2F1P35269 517 aaKnown RBP eCLIP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 DEKP35659 375 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 MAGEA10P43363 369 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 SLC6A11P48066 632 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 GFRA1P56159 465 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 PPP2CBP62714 309 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 PPP2CAP67775 309 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 IRX6P78412 446 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 HTRA3P83110 453 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 HS1BP3Q53T59 392 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF585AQ6P3V2 769 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TEPPQ6URK8 271 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 KCNT2Q6UVM3 1135 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 HHIPL2Q6UWX4 724 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 RIOX2Q8IUF8 465 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 IFNL2Q8IZJ0 200 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF513Q8N8E2 541 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 LINC00482Q8N8I6 264 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 SH3RF3Q8TEJ3 882 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 DCAF4Q8WV16 495 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 WRNIP1Q96S55 665 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TMEM209Q96SK2 561 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 ZNF341Q9BYN7 854 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 RIC8BQ9NVN3 520 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 ARHGAP20Q9P2F6 1191 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 CFDP1Q9UEE9 299 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 DSEQ9UL01 958 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 NOP58Q9Y2X3 529 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 X6R8D5 127 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 PTPN23Q9H3S7 1636 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TCOF1Q13428 1488 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 NCOA2Q15596 1464 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 RAD54L2Q9Y4B4 1467 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 KIF7Q2M1P5 1343 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TOPBP1Q92547 1522 aa2.63□□□□□ -1.99
SNRNP40-207ENST00000491106 TDRD9Q8NDG6 1382 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 FHOD3Q2V2M9 1422 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 CNTLNQ9NXG0 1405 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 TCRBV5S2A0A599 114 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GSTA4O15217 222 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 PLATP00750 562 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 SOD2P04179 222 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 ITGB3P05106 788 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 PABPC1P11940 636 aaKnown RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GRK2P25098 689 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GRK3P35626 688 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 DNM2P50570 870 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 MLLT6P55198 1093 aaPredicted RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 GUCY1A3Q02108 690 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 NFATC3Q12968 1075 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 TUSC3Q13454 348 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 DDR2Q16832 855 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 KIZQ2M2Z5 673 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 CR1LQ2VPA4 569 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 SLC10A6Q3KNW5 377 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 MTERF2Q49AM1 385 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 TBC1D10BQ4KMP7 808 aaPredicted RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 FAM26FQ5R3K3 315 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 ACBD5Q5T8D3 534 aaPredicted RBP2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 BTBD8Q5XKL5 378 aa2.62□□□□□ -1.99
SNRNP40-207ENST00000491106 USP51Q70EK9 711 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms