RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 ADCY6O43306 1168 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 DUSP11O75319 330 aaKnown RBP20.94■□□□□ 0.94
MCF2L-230ENST00000491028 CCNE2O96020 404 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 PTMSP20962 102 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 CMA1P23946 247 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 ACTR2P61160 394 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 EPHA7Q15375 998 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 SLC9C1Q4G0N8 1177 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 TMEM63BQ5T3F8 832 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 KRT79Q5XKE5 535 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 OR6J1Q8NGC5 347 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 SPATA33Q96N06 139 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 CCSER1Q9C0I3 900 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 BCAS3Q9H6U6 928 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 DISC1Q9NRI5 854 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 LMBRD1Q9NUN5 540 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 FAM13BQ9NYF5 915 aa20.94■□□□□ 0.94
MCF2L-230ENST00000491028 EML1O00423 815 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 NOP56O00567 594 aaKnown RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 MSCO60682 206 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 CNGA1P29973 690 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 CCND3P30281 292 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 UBA7P41226 1012 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 GJC2Q5T442 439 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 TLK2Q86UE8 772 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 PPTC7Q8NI37 304 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 SNX29Q8TEQ0 813 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 SEPT1Q8WYJ6 367 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 MRPS27Q92552 414 aaKnown RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 SYMPKQ92797 1274 aaKnown RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 HMX1Q9NP08 348 aaPredicted RBP20.93■□□□□ 0.94
MCF2L-230ENST00000491028 SAMM50Q9Y512 469 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 PCDHA10Q9Y5I2 948 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 KDM3AQ9Y4C1 1321 aa20.93■□□□□ 0.94
MCF2L-230ENST00000491028 FRMPD3Q5JV73 1810 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 WDR81Q562E7 1941 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 FAM237AA0A1B0GTK4 181 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 PP2D1A8MPX8 630 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 SORBS3O60504 671 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 ATG7O95352 703 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 PSAPP07602 524 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 RARBP10826 455 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 MUTP22033 750 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 SP4Q02446 784 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 HSDL1Q3SXM5 330 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 SPECC1Q5M775 1068 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 MIS18BP1Q6P0N0 1132 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 CABP7Q86V35 215 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 SH3TC2Q8TF17 1288 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 GPR20Q99678 358 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 EIF2AK1Q9BQI3 630 aaKnown RBP20.92■□□□□ 0.94
MCF2L-230ENST00000491028 AP5M1Q9H0R1 490 aa20.92■□□□□ 0.94
MCF2L-230ENST00000491028 GADD45BO75293 160 aaPredicted RBP20.91■□□□□ 0.94
MCF2L-230ENST00000491028 SUPT20HL2P0C7V6 817 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 RPA1P27694 616 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 ABHD15Q6UXT9 468 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 FSIP1Q8NA03 581 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 EPSTI1Q96J88 318 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 PYM1Q9BRP8 204 aaKnown RBP20.91■□□□□ 0.94
MCF2L-230ENST00000491028 MMTAG2Q9BU76 263 aaKnown RBP20.91■□□□□ 0.94
MCF2L-230ENST00000491028 POLR3CQ9BUI4 534 aaPredicted RBP20.91■□□□□ 0.94
MCF2L-230ENST00000491028 TUFT1Q9NNX1 390 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 DDX20Q9UHI6 824 aaKnown RBP20.91■□□□□ 0.94
MCF2L-230ENST00000491028 HPSEQ9Y251 543 aa20.91■□□□□ 0.94
MCF2L-230ENST00000491028 EMSYQ7Z589 1322 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 GSTTP1A0A1W2PQM5 241 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 DYNC1LI2O43237 492 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-230ENST00000491028 DKC1O60832 514 aaKnown RBP eCLIP20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CDC25AP30304 524 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CCT6AP40227 531 aaKnown RBP20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CPT1AP50416 773 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 NKX3-2P78367 333 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 BRDTQ58F21 947 aaPredicted RBP20.9■□□□□ 0.94
MCF2L-230ENST00000491028 HYIQ5T013 277 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CCDC73Q6ZRK6 1079 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 USP49Q70CQ1 688 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 KCTD17Q8N5Z5 321 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CALML4Q96GE6 196 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 HSD17B14Q9BPX1 270 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 NT5C3AQ9H0P0 336 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 UPF3AQ9H1J1 476 aaKnown RBP20.9■□□□□ 0.94
MCF2L-230ENST00000491028 SPC25Q9HBM1 224 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 CCDC39Q9UFE4 941 aa20.9■□□□□ 0.94
MCF2L-230ENST00000491028 LOXHD1Q8IVV2 1947 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 IGKV6D-21A0A0A0MT36 114 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 A6NJR5 290 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 P4HBP07237 508 aaKnown RBP20.89■□□□□ 0.93
MCF2L-230ENST00000491028 MMP3P08254 477 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 HOXD8P13378 290 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-230ENST00000491028 PFKFB1P16118 471 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 TCF7P36402 384 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-230ENST00000491028 GJA9P57773 515 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 AFG1LQ8WV93 481 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 ATP6V0A1Q93050 837 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 LENG1Q96BZ8 264 aaPredicted RBP20.89■□□□□ 0.93
MCF2L-230ENST00000491028 DYDC2Q96IM9 177 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 CDK5RAP3Q96JB5 506 aa20.89■□□□□ 0.93
MCF2L-230ENST00000491028 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.89■□□□□ 0.93
MCF2L-230ENST00000491028 SYNRGQ9UMZ2 1314 aa20.88■□□□□ 0.93
MCF2L-230ENST00000491028 IGSF9BQ9UPX0 1349 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms