RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 CCNE2O96020 404 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 OR52Z1P0C646 297 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 PTGS1P23219 599 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 RGS19P49795 217 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 SNX17Q15036 470 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 ATL3Q6DD88 541 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 MIS18BP1Q6P0N0 1132 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 CXCL17Q6UXB2 119 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 FERMT3Q86UX7 667 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 SPRYD3Q8NCJ5 442 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 C16orf70Q9BSU1 422 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 BCAS3Q9H6U6 928 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 STARD7Q9NQZ5 370 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 VAV3Q9UKW4 847 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 ZNF215Q9UL58 517 aaPredicted RBP17.87■□□□□ 0.45
TRA2A-208ENST00000490942 PCDHA12Q9UN75 941 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 CEP131Q9UPN4 1083 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 PCDHA10Q9Y5I2 948 aa17.87■□□□□ 0.45
TRA2A-208ENST00000490942 F13A1P00488 732 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
TRA2A-208ENST00000490942 LGALS2P05162 132 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 ATP2B1P20020 1258 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 DDIT3P35638 169 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 TCF7P36402 384 aaPredicted RBP17.86■□□□□ 0.45
TRA2A-208ENST00000490942 NUCB2P80303 420 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 PTPN11Q06124 597 aaPredicted RBP17.86■□□□□ 0.45
TRA2A-208ENST00000490942 ZNF174Q15697 407 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 ARL6IP4Q66PJ3 421 aaKnown RBP17.86■□□□□ 0.45
TRA2A-208ENST00000490942 ABHD15Q6UXT9 468 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 PLPPR4Q7Z2D5 763 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 C4orf32Q8N8J7 132 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 AFAP1L1Q8TED9 768 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 TNPO1Q92973 898 aaKnown RBP17.86■□□□□ 0.45
TRA2A-208ENST00000490942 SMARCAD1Q9H4L7 1026 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 PCDHB6Q9Y5E3 794 aa17.86■□□□□ 0.45
TRA2A-208ENST00000490942 A0A0U1RQG5 324 aaPredicted RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 HAS3O00219 553 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 PSAPP07602 524 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 MYL3P08590 195 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 SUPT20HL2P0C7V6 817 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 IRX5P78411 483 aaPredicted RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 ATP2C1P98194 919 aaPredicted RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 SPIRE1Q08AE8 756 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 NFRKBQ6P4R8 1299 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 SESTD1Q86VW0 696 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 SLC43A3Q8NBI5 491 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 DIS3LQ8TF46 1054 aaKnown RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 KAT2BQ92831 832 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 AZI2Q9H6S1 392 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 DISC1Q9NRI5 854 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 ERAP1Q9NZ08 941 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 CIZ1Q9ULV3 898 aaPredicted RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 RBM19Q9Y4C8 960 aaKnown RBP17.85■□□□□ 0.45
TRA2A-208ENST00000490942 ATP6V1DQ9Y5K8 247 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 STK24Q9Y6E0 443 aa17.85■□□□□ 0.45
TRA2A-208ENST00000490942 MROH7Q68CQ1 1323 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 H3BRB1 525 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 FXR2P51116 673 aaKnown RBP eCLIP17.84■□□□□ 0.45
TRA2A-208ENST00000490942 PTGDRQ13258 359 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 FAM160B1Q5W0V3 765 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
TRA2A-208ENST00000490942 HTATIP2Q9BUP3 242 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 RAB34Q9BZG1 259 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 SENP6Q9GZR1 1112 aaPredicted RBP17.84■□□□□ 0.45
TRA2A-208ENST00000490942 TMEM60Q9H2L4 133 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 UNC45AQ9H3U1 944 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 TUT1Q9H6E5 874 aaKnown RBP17.84■□□□□ 0.45
TRA2A-208ENST00000490942 TTC12Q9H892 705 aaPredicted RBP17.84■□□□□ 0.45
TRA2A-208ENST00000490942 SCN10AQ9Y5Y9 1956 aa17.84■□□□□ 0.45
TRA2A-208ENST00000490942 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.44
TRA2A-208ENST00000490942 DKC1O60832 514 aaKnown RBP eCLIP17.83■□□□□ 0.44
TRA2A-208ENST00000490942 STAT5BP51692 787 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 SP4Q02446 784 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 ITGA7Q13683 1181 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 PDIA5Q14554 519 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 EPHA7Q15375 998 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 SLC39A5Q6ZMH5 540 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 MIER3Q7Z3K6 550 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 NEK9Q8TD19 979 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 TOX2Q96NM4 488 aa17.83■□□□□ 0.44
TRA2A-208ENST00000490942 RNF216Q9NWF9 866 aaPredicted RBP17.83■□□□□ 0.44
TRA2A-208ENST00000490942 MAFBQ9Y5Q3 323 aaPredicted RBP17.83■□□□□ 0.44
TRA2A-208ENST00000490942 IGSF9BQ9UPX0 1349 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 ARVCFO00192 962 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 SORBS3O60504 671 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 TXKP42681 527 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 PSEN2P49810 448 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 CDK7P50613 346 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 PKP1Q13835 747 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 NBR1Q14596 966 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 MFSD10Q14728 455 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 ANKRD33Q7Z3H0 272 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 GLG1Q92896 1179 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 ATP6V0A1Q93050 837 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 FERMT2Q96AC1 680 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 PCYT2Q99447 389 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 ZNF302Q9NR11 478 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms