RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 TTI2Q6NXR4 508 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 SLC30A9Q6PML9 568 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 TBC1D5Q92609 795 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 NUP58Q9BVL2 599 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 YIPF3Q9GZM5 350 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 SEC63Q9UGP8 760 aaKnown RBP11.15□□□□□ -0.63
BRD9-209ENST00000490814 NFU1Q9UMS0 254 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 PCDHA6Q9UN73 950 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 PCDHA8Q9Y5H6 950 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 PDS5AQ29RF7 1337 aaKnown RBP11.15□□□□□ -0.63
BRD9-209ENST00000490814 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 NUP188Q5SRE5 1749 aa11.15□□□□□ -0.63
BRD9-209ENST00000490814 SMCO2A6NFE2 343 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 KLRF2D3W0D1 207 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 ZSCAN9O15535 394 aaPredicted RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 OR52Z1P0C646 297 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 EIF6P56537 245 aaKnown RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 USP17L2Q6R6M4 530 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 PCDHA13Q9Y5I0 950 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 A0A1W2PQC6 194 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 LSP1P33241 339 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 KIF11P52732 1056 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 AMPD3Q01432 767 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 DBN1Q16643 649 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 GIMAP8Q8ND71 665 aaPredicted RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 GPR101Q96P66 508 aaPredicted RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 DUSP9Q99956 384 aaKnown RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 RGL1Q9NZL6 768 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 ARPP21Q9UBL0 812 aaPredicted RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 ATXN2Q99700 1313 aaKnown RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 NID2Q14112 1375 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 MYH2Q9UKX2 1941 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 BACH1O14867 736 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 RIMBP2O15034 1052 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 PAX3P23760 479 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 SLC8A1P32418 973 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 HLTFQ14527 1009 aaKnown RBP eCLIP11.14□□□□□ -0.63
BRD9-209ENST00000490814 NONOQ15233 471 aaKnown RBP eCLIP11.14□□□□□ -0.635e-7■■■□□ 19.1
BRD9-209ENST00000490814 NAA35Q5VZE5 725 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 TRIM42Q8IWZ5 723 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 TRIM58Q8NG06 486 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 DHTKD1Q96HY7 919 aaPredicted RBP11.14□□□□□ -0.63
BRD9-209ENST00000490814 MS4A14Q96JA4 679 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 TRIM9Q9C026 710 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 EPB41L5Q9HCM4 733 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 STIM2Q9P246 746 aa11.14□□□□□ -0.63
BRD9-209ENST00000490814 DOT1LQ8TEK3 1739 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 GOLGA6L10A6NI86 522 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 C6orf229H3BNL8 230 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 EPHB6O15197 1021 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 FECHP22830 423 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 EPS15P42566 896 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 RPS8P62241 208 aaKnown RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 HDLBPQ00341 1268 aaKnown RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 GUCY2DQ02846 1103 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 GFPT1Q06210 699 aaPredicted RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 PRR5LQ6MZQ0 368 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 PARP9Q8IXQ6 854 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 ZNF473Q8WTR7 871 aaKnown RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 SH3GL2Q99962 352 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 ATP8A2Q9NTI2 1148 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 RBM47A0AV96 593 aaKnown RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 AHCYL1O43865 530 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 KLRC4O43908 158 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 RASSF9O75901 435 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 RHOBTB3O94955 611 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 NR1D1P20393 614 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 GNAQP50148 359 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 FHDC1Q9C0D6 1143 aaPredicted RBP11.13□□□□□ -0.63
BRD9-209ENST00000490814 SLC40A1Q9NP59 571 aa11.13□□□□□ -0.63
BRD9-209ENST00000490814 LRRC53A6NM62 1247 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 TNNI2P48788 182 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 CARSP49589 748 aaKnown RBP11.12□□□□□ -0.63
BRD9-209ENST00000490814 CNNM4Q6P4Q7 775 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 TXNRD3Q86VQ6 643 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 SPATS2Q86XZ4 545 aaKnown RBP11.12□□□□□ -0.63
BRD9-209ENST00000490814 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 NELFCDQ8IXH7 590 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 C4orf32Q8N8J7 132 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 FAM81AQ8TBF8 368 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 TBCKQ8TEA7 893 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 SH3RF3Q8TEJ3 882 aaPredicted RBP11.12□□□□□ -0.63
BRD9-209ENST00000490814 NDST4Q9H3R1 872 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 IL17RBQ9NRM6 502 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 TMEM260Q9NX78 707 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.12□□□□□ -0.636e-12■□□□□ 9.7
BRD9-209ENST00000490814 ZSCAN5CA6NGD5 496 aaPredicted RBP11.12□□□□□ -0.63
BRD9-209ENST00000490814 H0YIN7 160 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 TRAF5O00463 557 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 ORC4O43929 436 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 FTCDO95954 541 aa11.12□□□□□ -0.63
BRD9-209ENST00000490814 LDHBP07195 334 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms