RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MAP3K14Q99558 947 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 UPF3AQ9H1J1 476 aaKnown RBP8.69□□□□□ -1.02
CLDN1-202ENST00000490800 ALG2Q9H553 416 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 KAT14Q9H8E8 782 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 RBM28Q9NW13 759 aaKnown RBP8.69□□□□□ -1.02
CLDN1-202ENST00000490800 ORC3Q9UBD5 711 aaPredicted RBP8.69□□□□□ -1.02
CLDN1-202ENST00000490800 ASTN1O14525 1302 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 ELP1O95163 1332 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 STK36Q9NRP7 1315 aa8.69□□□□□ -1.02
CLDN1-202ENST00000490800 PLXNA1Q9UIW2 1896 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 VPS37CA5D8V6 355 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 ARVCFO00192 962 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 NFIBO00712 420 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 PLEKHA8P1O95397 391 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 GOLGA8HP0CJ92 632 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 SNHG28P0DPA3 235 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 PDIA4P13667 645 aaKnown RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 PTK2Q05397 1052 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 SSRP1Q08945 709 aaKnown RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 GRM4Q14833 912 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 FAM109BQ6ICB4 259 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 TMTC3Q6ZXV5 915 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 FBXO16Q8IX29 292 aaPredicted RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 GPKOWQ92917 476 aaPredicted RBP eCLIP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 PHKBQ93100 1093 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 UBA5Q9GZZ9 404 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 CPVLQ9H3G5 476 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 GNEQ9Y223 722 aaKnown RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 STXBP5LQ9Y2K9 1186 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
CLDN1-202ENST00000490800 BAZ2BQ9UIF8 2168 aaKnown RBP8.68□□□□□ -1.02
CLDN1-202ENST00000490800 A0A0U1RQG5 324 aaPredicted RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 BAG4O95429 457 aaKnown RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 F13A1P00488 732 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 TIMP1P01033 207 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 COL6A3P12111 3177 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CALML3P27482 149 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 MCM4P33991 863 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 NKX3-2P78367 333 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CXCL17Q6UXB2 119 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 RNF207Q6ZRF8 634 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CMTR1Q8N1G2 835 aaKnown RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 SRBD1Q8N5C6 995 aaKnown RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 MORC4Q8TE76 937 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CLEC4DQ8WXI8 215 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 CHAMP1Q96JM3 812 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 AIFM3Q96NN9 605 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 SLC26A6Q9BXS9 759 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 AP5M1Q9H0R1 490 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 ADD3Q9UEY8 706 aaKnown RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 MAD2L2Q9UI95 211 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 PCDHB9Q9Y5E1 797 aa8.67□□□□□ -1.02
CLDN1-202ENST00000490800 LAMA2P24043 3122 aaKnown RBP8.67□□□□□ -1.02
CLDN1-202ENST00000490800 GRIN2DO15399 1336 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 MROH7Q68CQ1 1323 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 CNTNAP5Q8WYK1 1306 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 H3BQV1 296 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 PRPF3O43395 683 aaKnown RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 RFX1P22670 979 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 KIF5BP33176 963 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 ALDH5A1P51649 535 aaPredicted RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 RPS6P62753 249 aaKnown RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 FPGSQ05932 587 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 RESTQ13127 1097 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 AGERQ15109 404 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 FSCN1Q16658 493 aaKnown RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 SLC35G1Q2M3R5 365 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 GPATCH4Q5T3I0 446 aaKnown RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 ZNF697Q5TEC3 545 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 MFSD5Q6N075 450 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 SLC30A10Q6XR72 485 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 C16orf59Q7L2K0 433 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 TLK2Q86UE8 772 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 BAP1Q92560 729 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 TBC1D5Q92609 795 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 C8orf76Q96K31 380 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 GUCD1Q96NT3 240 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 UCN2Q96RP3 112 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 ALG1Q9BT22 464 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 RNF26Q9BY78 433 aaPredicted RBP8.66□□□□□ -1.02
CLDN1-202ENST00000490800 WDR11Q9BZH6 1224 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 SEMA6BQ9H3T3 888 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 VAT1LQ9HCJ6 419 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 VTA1Q9NP79 307 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 TBX21Q9UL17 535 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 Q9Y3F1 56 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 GPSM3Q9Y4H4 160 aa8.66□□□□□ -1.02
CLDN1-202ENST00000490800 MYH6P13533 1939 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 RNF223E7ERA6 249 aa8.65□□□□□ -1.02
CLDN1-202ENST00000490800 TLR3O15455 904 aaKnown RBP8.65□□□□□ -1.02
CLDN1-202ENST00000490800 ZEB2O60315 1214 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms