RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 SETQ01105 290 aaPredicted RBP17.49■□□□□ 0.39
VPS26A-207ENST00000490696 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
VPS26A-207ENST00000490696 C7orf31Q8N865 590 aa17.49■□□□□ 0.39
VPS26A-207ENST00000490696 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
VPS26A-207ENST00000490696 LLPHQ9BRT6 129 aaKnown RBP17.49■□□□□ 0.39
VPS26A-207ENST00000490696 IPO5O00410 1097 aaKnown RBP17.48■□□□□ 0.39
VPS26A-207ENST00000490696 DHX15O43143 795 aaKnown RBP17.48■□□□□ 0.39
VPS26A-207ENST00000490696 ST18O60284 1047 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 HOXC8P31273 242 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 EPHB4P54760 987 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 FPGSQ05932 587 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 HIC1Q14526 733 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 PTGISQ16647 500 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 PRR16Q569H4 304 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 UTP14CQ5TAP6 766 aaKnown RBP17.48■□□□□ 0.39
VPS26A-207ENST00000490696 KRT25Q7Z3Z0 450 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 OXER1Q8TDS5 423 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 WNT8AQ9H1J5 351 aa17.48■□□□□ 0.39
VPS26A-207ENST00000490696 CYP3A7-CYP3A51PA0A087WV96 503 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 LGR5O75473 907 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 CD2BP2O95400 341 aaKnown RBP17.47■□□□□ 0.39
VPS26A-207ENST00000490696 CCNE2O96020 404 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 CYP3A7P24462 503 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 ACTR2P61160 394 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 NONOQ15233 471 aaKnown RBP eCLIP17.47■□□□□ 0.39
VPS26A-207ENST00000490696 PCYT2Q99447 389 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 ZNF577Q9BSK1 485 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 ZNF215Q9UL58 517 aaPredicted RBP17.47■□□□□ 0.39
VPS26A-207ENST00000490696 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
VPS26A-207ENST00000490696 ATG7O95352 703 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 CSF2RAP15509 400 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.39
VPS26A-207ENST00000490696 INF2Q27J81 1249 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 C9orf50Q5SZB4 431 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 TMEM199Q8N511 208 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 DHX38Q92620 1227 aaKnown RBP17.46■□□□□ 0.39
VPS26A-207ENST00000490696 TNFRSF25Q93038 417 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 MBOAT7Q96N66 472 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 UIMC1Q96RL1 719 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 NOD1Q9Y239 953 aa17.46■□□□□ 0.39
VPS26A-207ENST00000490696 CCDC194A0A1B0GVG4 234 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 DDX39AO00148 427 aaKnown RBP17.45■□□□□ 0.38
VPS26A-207ENST00000490696 DLL1O00548 723 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 PITPNM1O00562 1244 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 MSH4O15457 936 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 TDP2O95551 362 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 MMP1P03956 469 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 KRT2P35908 639 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 CCL23P55773 120 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 NR5A1Q13285 461 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 PPIGQ13427 754 aaKnown RBP eCLIP17.45■□□□□ 0.38
VPS26A-207ENST00000490696 SHHQ15465 462 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 Q4G0T1 1027 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
VPS26A-207ENST00000490696 KRT40Q6A162 431 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 MOXD1Q6UVY6 613 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 C16orf59Q7L2K0 433 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 SMARCAD1Q9H4L7 1026 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 TBC1D22BQ9NU19 505 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 TRIP12Q14669 1992 aaPredicted RBP17.45■□□□□ 0.38
VPS26A-207ENST00000490696 SZT2Q5T011 3432 aa17.45■□□□□ 0.38
VPS26A-207ENST00000490696 IGKV6D-21A0A0A0MT36 114 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 C17orf102A2RUQ5 167 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 FOSBP53539 338 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 HMGN5P82970 282 aaKnown RBP17.44■□□□□ 0.38
VPS26A-207ENST00000490696 RBL2Q08999 1139 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 BFSP2Q13515 415 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 LRIT3Q3SXY7 679 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 ABHD15Q6UXT9 468 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 PIK3AP1Q6ZUJ8 805 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 CAGE1Q8TC20 777 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 GLG1Q92896 1179 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 VWCEQ96DN2 955 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 BRMS1Q9HCU9 246 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 ERAP1Q9NZ08 941 aa17.44■□□□□ 0.38
VPS26A-207ENST00000490696 FAM205CA6NFA0 338 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 BTBD18B2RXH4 712 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 MARK3P27448 753 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 ADAM17P78536 824 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 PTK7Q13308 1070 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 TRIM29Q14134 588 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 TRIM71Q2Q1W2 868 aaKnown RBP17.43■□□□□ 0.38
VPS26A-207ENST00000490696 ZNF746Q6NUN9 644 aaPredicted RBP17.43■□□□□ 0.38
VPS26A-207ENST00000490696 PLPPR4Q7Z2D5 763 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 NEK8Q86SG6 692 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 SERINC5Q86VE9 423 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 SLC5A5Q92911 643 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 ATP6V0A1Q93050 837 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 WNT8BQ93098 351 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 SCLYQ96I15 445 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 TMX3Q96JJ7 454 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 IL23AQ9NPF7 189 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 SETD4Q9NVD3 440 aa17.43■□□□□ 0.38
VPS26A-207ENST00000490696 SOX1O00570 391 aaPredicted RBP17.42■□□□□ 0.38
VPS26A-207ENST00000490696 TREHO43280 583 aa17.42■□□□□ 0.38
VPS26A-207ENST00000490696 IQCF3P0C7M6 154 aa17.42■□□□□ 0.38
VPS26A-207ENST00000490696 ACRP10323 421 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms