RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 TPTE2Q6XPS3 522 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 VPS52Q8N1B4 723 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 CHMP6Q96FZ7 201 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 NOC2LQ9Y3T9 749 aaKnown RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 GALNT17Q6IS24 598 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 UNC13DQ70J99 1090 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 PHLDB2Q86SQ0 1253 aa13.97□□□□□ -0.17
SHOX2-205ENST00000490689 GIMAP8Q8ND71 665 aaPredicted RBP13.97□□□□□ -0.17
SHOX2-205ENST00000490689 IFNB1P01574 187 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 COPB2P35606 906 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 KCNH2Q12809 1159 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 DDB1Q16531 1140 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 NT5DC1Q5TFE4 455 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 EP400NLQ6ZTU2 488 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 CNOT10Q9H9A5 744 aaKnown RBP13.96□□□□□ -0.17
SHOX2-205ENST00000490689 VPS37BQ9H9H4 285 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 CEP72Q9P209 647 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ARHGAP20Q9P2F6 1191 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ENO4A6NNW6 628 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 E9PMD0 336 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 POC1B-GALNT4F8VUJ3 575 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 RHOBTB3O94955 611 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 AFPP02771 609 aaKnown RBP13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ACTN1P12814 892 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 TNIP1Q15025 636 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ARMC9Q7Z3E5 817 aa13.96□□□□□ -0.17
SHOX2-205ENST00000490689 ATP2A1O14983 1001 aa13.96□□□□□ -0.18
SHOX2-205ENST00000490689 KCNB1Q14721 858 aa13.96□□□□□ -0.18
SHOX2-205ENST00000490689 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.18
SHOX2-205ENST00000490689 CYB5D1Q6P9G0 228 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 CROCCP2Q86T23 111 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 ELOA2Q8IYF1 753 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-205ENST00000490689 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-205ENST00000490689 FAM53CQ9NYF3 392 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 NOP53Q9NZM5 478 aaKnown RBP13.95□□□□□ -0.18
SHOX2-205ENST00000490689 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 TDP2O95551 362 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
SHOX2-205ENST00000490689 PDHA1P08559 390 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 AARSP49588 968 aaKnown RBP eCLIP13.95□□□□□ -0.184e-6■■■■□ 24
SHOX2-205ENST00000490689 KIF2BQ8N4N8 673 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 MTMR8Q96EF0 704 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 YY1AP1Q9H869 796 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 BCS1LQ9Y276 419 aa13.95□□□□□ -0.18
SHOX2-205ENST00000490689 DIAPH2O60879 1101 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 HSD17B3P37058 310 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PDXDC2PQ6P474 469 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PARP2Q9UGN5 583 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 BZW2Q9Y6E2 419 aaKnown RBP13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PLA2G4BP0C869 781 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
SHOX2-205ENST00000490689 CASP7P55210 303 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 TROAPQ12815 778 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 GNPTABQ3T906 1256 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 REXO2Q9Y3B8 237 aaKnown RBP13.94□□□□□ -0.18
SHOX2-205ENST00000490689 UFL1O94874 794 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 GAS8O95995 478 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 SP4Q02446 784 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 DPP8Q6V1X1 898 aaPredicted RBP13.94□□□□□ -0.18
SHOX2-205ENST00000490689 CREG2Q8IUH2 290 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 CCDC127Q96BQ5 260 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 TMEM47Q9BQJ4 181 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 PACSIN1Q9BY11 444 aa13.94□□□□□ -0.18
SHOX2-205ENST00000490689 A0A087X0T9 212 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 MYMKA6NI61 221 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 CCDC188H7C350 402 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 WNT7AO00755 349 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 TRIM37O94972 964 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 FAM228BP0C875 321 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 BCRP11274 1271 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 RFC4P35249 363 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 TCP10Q12799 353 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 TTMPQ5BVD1 217 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 SMC6Q96SB8 1091 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■□□□□ 9.9
SHOX2-205ENST00000490689 PCDHA6Q9UN73 950 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PCDHA8Q9Y5H6 950 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 TSPOAP1O95153 1857 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 FYB2Q5VWT5 728 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 KCTD1Q719H9 257 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 SGSM3Q96HU1 749 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 TMOD4Q9NZQ9 345 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
SHOX2-205ENST00000490689 CHN1P15882 459 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PLCG2P16885 1265 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 FGFR4P22455 802 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
SHOX2-205ENST00000490689 NBPF9Q3BBW0 867 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 GLYCTKQ8IVS8 523 aa13.93□□□□□ -0.18
SHOX2-205ENST00000490689 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
SHOX2-205ENST00000490689 PRMT1Q99873 361 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms