RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 RTF1Q92541 710 aaKnown RBP5.8□□□□□ -1.48
RBM39-235ENST00000490354 SPATA25Q9BR10 227 aa5.8□□□□□ -1.48
RBM39-235ENST00000490354 IFT57Q9NWB7 429 aa5.8□□□□□ -1.48
RBM39-235ENST00000490354 BTG4Q9NY30 223 aa5.8□□□□□ -1.48
RBM39-235ENST00000490354 SUCOQ9UBS9 1254 aaKnown RBP5.8□□□□□ -1.48
RBM39-235ENST00000490354 JCADQ9P266 1359 aa5.8□□□□□ -1.48
RBM39-235ENST00000490354 TRPM3Q9HCF6 1732 aaPredicted RBP5.79□□□□□ -1.48
RBM39-235ENST00000490354 ABCC6O95255 1503 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 RNF123Q5XPI4 1314 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 USP54Q70EL1 1684 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 H0Y8X5 98 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 CHL1O00533 1208 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 GNAI1P63096 354 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 PUM1Q14671 1186 aaKnown RBP eCLIP5.79□□□□□ -1.48
RBM39-235ENST00000490354 UBXN11Q5T124 520 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 NT5DC1Q5TFE4 455 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 CWF19L1Q69YN2 538 aaKnown RBP5.79□□□□□ -1.48
RBM39-235ENST00000490354 BICRALQ6AI39 1079 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 TOM1L2Q6ZVM7 507 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 CCDC144CPQ8IYA2 1237 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 IL17REQ8NFR9 667 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 ZNF526Q8TF50 670 aaPredicted RBP5.79□□□□□ -1.48
RBM39-235ENST00000490354 USP40Q9NVE5 1235 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 BABAM1Q9NWV8 329 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 GGT7Q9UJ14 662 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 RCAN3Q9UKA8 241 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 PMF1-BGLAPU3KQ54 211 aa5.79□□□□□ -1.48
RBM39-235ENST00000490354 SPATA31A6Q5VVP1 1343 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 FANCIQ9NVI1 1328 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 A0A1W2PQJ5 194 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 FGF10O15520 208 aaPredicted RBP5.78□□□□□ -1.48
RBM39-235ENST00000490354 ACRP10323 421 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 HSPA1LP34931 641 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 HTRA3P83110 453 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 DCTN1Q14203 1278 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 TDRD10Q5VZ19 366 aaKnown RBP5.78□□□□□ -1.48
RBM39-235ENST00000490354 MCM10Q7L590 875 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 SLITRK4Q8IW52 837 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 NKD1Q969G9 470 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 THUMPD2Q9BTF0 503 aaKnown RBP5.78□□□□□ -1.48
RBM39-235ENST00000490354 PEAK1Q9H792 1746 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 PDLIM7Q9NR12 457 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 ANKRD26Q9UPS8 1709 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 XIRP1Q702N8 1843 aaKnown RBP5.78□□□□□ -1.48
RBM39-235ENST00000490354 KIF20BQ96Q89 1820 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 ALS2Q96Q42 1657 aa5.78□□□□□ -1.48
RBM39-235ENST00000490354 F8W031 263 aaPredicted RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 K7ESM1 405 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 HSP90AB1P08238 724 aaKnown RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 IL2RBP14784 551 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 TACR1P25103 407 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 MC3RP41968 323 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 PRR5P85299 388 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 EXOSC9Q06265 439 aaKnown RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 TAF7Q15545 349 aaPredicted RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 C1orf141Q5JVX7 400 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 DCAF15Q66K64 600 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 ZNF530Q6P9A1 599 aaPredicted RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 HS2ST1Q7LGA3 356 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 SAPCD2Q86UD0 394 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 IFNL2Q8IZJ0 200 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 BRF1Q92994 677 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 ZNF428Q96B54 188 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 DHRS1Q96LJ7 313 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 SRRTQ9BXP5 876 aaKnown RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 FAN1Q9Y2M0 1017 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 SHPRHQ149N8 1683 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 MAP3K5Q99683 1374 aa5.77□□□□□ -1.49
RBM39-235ENST00000490354 COL5A2P05997 1499 aaPredicted RBP5.77□□□□□ -1.49
RBM39-235ENST00000490354 CAMTA1Q9Y6Y1 1673 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 CRB1P82279 1406 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 RGPD8O14715 1765 aaPredicted RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 SH3D21A4FU49 640 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 RNMTO43148 476 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 PHKG2P15735 406 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 RARSP54136 660 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 ZNF445P59923 1031 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 DLX2Q07687 328 aaPredicted RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 CYP2R1Q6VVX0 501 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 PPFIBP1Q86W92 1011 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 UNC5CLQ8IV45 518 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 ZCRB1Q8TBF4 217 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 FCRL3Q96P31 734 aaPredicted RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 GPR20Q99678 358 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 NT5C1AQ9BXI3 368 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 RNF38Q9H0F5 515 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 DBR1Q9UK59 544 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 CNOT11Q9UKZ1 510 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 MYRFQ9Y2G1 1151 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 THRAP3Q9Y2W1 955 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 LAS1LQ9Y4W2 734 aaKnown RBP5.76□□□□□ -1.49
RBM39-235ENST00000490354 DUSP10Q9Y6W6 482 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 CEMIPQ8WUJ3 1361 aa5.76□□□□□ -1.49
RBM39-235ENST00000490354 ROBO1Q9Y6N7 1651 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 NHSL1Q5SYE7 1610 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 PHRF1Q9P1Y6 1649 aaKnown RBP5.75□□□□□ -1.49
RBM39-235ENST00000490354 CYP27B1O15528 508 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 VAMP4O75379 141 aa5.75□□□□□ -1.49
RBM39-235ENST00000490354 ASGR2P07307 311 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms