RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 FANCCQ00597 558 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 PAK1Q13153 545 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 MTMR2Q13614 643 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 RASA3Q14644 834 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 SLC35G1Q2M3R5 365 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 TKFCQ3LXA3 575 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 EARS2Q5JPH6 523 aaKnown RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 HYIQ5T013 277 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 PDXDC2PQ6P474 469 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 STXBP4Q6ZWJ1 553 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 NIPA1Q7RTP0 329 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 FCHSD1Q86WN1 690 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 EHBP1Q8NDI1 1231 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 LARP4BQ92615 738 aaKnown RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 COA7Q96BR5 231 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 SHISA4Q96DD7 197 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 NAA15Q9BXJ9 866 aaKnown RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 WDR11Q9BZH6 1224 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 TTC12Q9H892 705 aaPredicted RBP7.11□□□□□ -1.27
SF3A3-208ENST00000489537 KCND2Q9NZV8 630 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 PRR12Q9ULL5 1215 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 NFE2L3Q9Y4A8 694 aa7.11□□□□□ -1.27
SF3A3-208ENST00000489537 CASP8AP2Q9UKL3 1982 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 LRRC10BA6NIK2 292 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 DKC1O60832 514 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3A3-208ENST00000489537 STAM2O75886 525 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 ICAM1P05362 532 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 BCRP11274 1271 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 COPB2P35606 906 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SLC16A2P36021 539 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 TECP42680 631 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 AFMP43652 599 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 CTCFP49711 727 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-208ENST00000489537 GHRHRQ02643 423 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 HSP90AA2PQ14568 343 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-208ENST00000489537 PTPRNQ16849 979 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 NBPF9Q3BBW0 867 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SPECC1Q5M775 1068 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 TTBK2Q6IQ55 1244 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 UNC13DQ70J99 1090 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 PPFIBP1Q86W92 1011 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SIAH1Q8IUQ4 282 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 CCDC65Q8IXS2 484 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SCYL3Q8IZE3 742 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 GIMAP8Q8ND71 665 aaPredicted RBP7.1□□□□□ -1.27
SF3A3-208ENST00000489537 RASGRP4Q8TDF6 673 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SNX29Q8TEQ0 813 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 CCDC51Q96ER9 411 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 C12orf42Q96LP6 360 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 PRIMPOLQ96LW4 560 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 TSG101Q99816 390 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 SLF1Q9BQI6 1058 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 BEGAINQ9BUH8 593 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 THAP9Q9H5L6 903 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 PRDM10Q9NQV6 1147 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 KCND1Q9NSA2 647 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 GGA3Q9NZ52 723 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 TMOD4Q9NZQ9 345 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 KCNG1Q9UIX4 513 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF112Q9UJU3 913 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 FZD1Q9UP38 647 aa7.1□□□□□ -1.27
SF3A3-208ENST00000489537 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.1□□□□□ -1.27
SF3A3-208ENST00000489537 HTTP42858 3142 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 J3QL48 77 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 MEIS2O14770 477 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ZSCAN12O43309 604 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 PPP1R12BO60237 982 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 OFD1O75665 1012 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 GNA14O95837 355 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ALDH1A1P00352 501 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ZNF18P17022 549 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 PLCG1P19174 1290 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 SCP2P22307 547 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 RPA1P27694 616 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ABCD1P33897 745 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 CCT6AP40227 531 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ASIC1P78348 528 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 LRRC63Q05C16 580 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 PPP2R3AQ06190 1150 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 NOLC1Q14978 699 aaKnown RBP eCLIP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 NCAPHQ15003 741 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 KARSQ15046 597 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 DNTTIP2Q5QJE6 756 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 NOL9Q5SY16 702 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 ANGEL2Q5VTE6 544 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 SPECC1LQ69YQ0 1117 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 CCDC186Q7Z3E2 898 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 CNGA4Q8IV77 575 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 TXLNBQ8N3L3 684 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 RETREG2Q8NC44 543 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 SLC17A8Q8NDX2 589 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 CDCA5Q96FF9 252 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 CDHR1Q96JP9 859 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 MPHOSPH6Q99547 160 aaKnown RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 RIT2Q99578 217 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 POLR3CQ9BUI4 534 aaPredicted RBP7.09□□□□□ -1.27
SF3A3-208ENST00000489537 NUP58Q9BVL2 599 aa7.09□□□□□ -1.27
SF3A3-208ENST00000489537 TIPINQ9BVW5 301 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms